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SCNpilot_expt_500_bf_scaffold_29010_4

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 2681..3304

Top 3 Functional Annotations

Value Algorithm Source
TraF-like protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4J3_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 197.0
  • Bit_score: 368
  • Evalue 4.80e-99
  • rbh
TraF-like protein {ECO:0000313|EMBL:EGD60463.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.9
  • Coverage: 197.0
  • Bit_score: 368
  • Evalue 6.80e-99
TraF-like protein; K12057 conjugal transfer pilus assembly protein TraF similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 143.0
  • Bit_score: 192
  • Evalue 1.50e-46

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Taxonomy

Novosphingobium nitrogenifigens → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGCGCCAAGCCTCACGCCCTTTAGCCGCCACGCTGATCGCCTTGCTGACCAGCGCAAGCCTCGTCACCGCCAGTCCGCTGATGGCCTTGGGAACCCCTCCGGCCAGCGCCGCGCTGGAACAAGAGGACATGTCCAATCGTGAGAACGTGGACCCGTCCACGAGTGGGCAAGTGGACAGGTCCACTGGTGAACATGTGGACACGTCCACAGTTGCCGGTGATCCCTTCTATTGCGGCGAGCGCAAACTCGGCACCTGGTTCTACTGCGAGCGCCCCAAGCCCAAGACGTCCGATCCCAGCGCTTCGGCCAGTGCCGCATCGCCCAGCTACCGCCAGCAACTCAACAAGATCGGCGCGCGGCTTGAGGAGCTGAAAGCCAAGGCGATCCTCGAGCCGACCTCGGACAACATCATCGCCTATGTCCGCTACCAGCGCGAACAGCTCGACCGCGCTTCGACCTTTGCCGATGTGTGGGAGCGCGCCATCTGGCAGCACGCCGATCTCGACTACACGCTTCAGCGGCCGGTCAGCACGCTGGGCAAGACCGCTTGGCTTGCCCAGCGCAAGACTGACCGGGAGGCCGTGATTGCCTCGCTGTCGGAACGCTACGGCCTGTTCTTCTTC
PROTEIN sequence
Length: 208
MRQASRPLAATLIALLTSASLVTASPLMALGTPPASAALEQEDMSNRENVDPSTSGQVDRSTGEHVDTSTVAGDPFYCGERKLGTWFYCERPKPKTSDPSASASAASPSYRQQLNKIGARLEELKAKAILEPTSDNIIAYVRYQREQLDRASTFADVWERAIWQHADLDYTLQRPVSTLGKTAWLAQRKTDREAVIASLSERYGLFFF