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SCNpilot_expt_500_bf_scaffold_24_2

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: comp(231..1511)

Top 3 Functional Annotations

Value Algorithm Source
Small-conductance mechanosensitive channel n=1 Tax=Variovorax sp. CF313 RepID=J2K9G0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 426.0
  • Bit_score: 770
  • Evalue 1.10e-219
  • rbh
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:EJL76895.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 426.0
  • Bit_score: 770
  • Evalue 1.60e-219
mechanosensitive ion channel MscS similarity KEGG
DB: KEGG
  • Identity: 90.8
  • Coverage: 426.0
  • Bit_score: 759
  • Evalue 4.80e-217
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGAATTTCAACGACTTCACCCAACGCCTGAGCCAGGTCGAGGCACGCGGCATCGCCATCGAACTCGCCGTGCTGGCGGCCTGCGTCGCCCTGGCCTGGGGCGTGTGCAAATGGTTCGGGCGCGACCAGCCCAAGGACTCGATCTGGTTCGGCGAGCGCACCTTCGACGGCGTGCTGTTCCCGCTGCTCGCGCTGATGCTCACCGACCTCGCCCGGCGCGCGGTGATCGATTTTCAGACGGTGTTGGTGCTGCGCATCGCTGTGTCGATGTTCCTGTCGCTGGCGGTGATTCGGCTGTTCGCTCGGGTGCTGCGTGCGGTGTTTCCGGCTTCCAACCTGGTGCGGCTGCTGGAGCGCACCGTCTCGTGGCTGGCGTGGATCGCGGCGGTGCTGTGGATCGTGGGCCTGCTGCCGCCGGTGCTGGCGGAACTCGACGACATCACGCTGGCCTTCGGCAAGACGCGCGTGAGCCTGCAGACCATCATCCAGGGCGTGCTGTCGGCGGGCCTCGTGATGGTGATCGCGCTGTGGATCTCGAGTACGGTCGAAAAGCGCATCCTGCGCGAGGCCGTCACCGATCTGTCGATGCGCAAGGTGGCGTCGAACGCGGTGCGCGCCTTCCTGCTGCTGATCGGCCTGCTGTTCGCGCTGTCGGCGGTGGGGGTGGACCTGACGGCGCTGTCGGTGCTGGGCGGCGCGCTCGGCGTGGGGCTGGGCTTCGGCCTGCAGAAGCTGGCGTCCAACTACGTGAGCGGCTTCGTGATTCTGCTGGAGCGCTCGATCCGCATCGGCGACAACGTGAAGGTCGACACCTTCGAGGGCCGCATCACCGACATCAAGACGCGCTACACGCTCATTCGCGCGGGCAACGGCCGCGAGGCCATCGTGCCGAACGAATCGCTCATCACCAGCCGGGTCGAGAACCTGTCGCTGGCCGACCGCAAGTTCAACATCACGACCACCATCGTGGTGGGCTACGAGAGCGACGTGGCGCAGGTGCAGTCCATTCTTTGCGAGGCGGCCAAGGCCCAGCCGCGCGTGATGACCGATCCGGCGCCGGTGGCCTTCCTGATGAACTTCGCGCCCGACGGGCTGGAGTTCACGCTCAACTTCTGGGTGACCGACCCCGACAAGGGCAAGGACAACCTGCGCTCGGCCATCAACATCGCCATCCTCGACGGCCTGCGTGGCGCGGGGATTGATATTCCCTATCCGCAGCGCGTCGTGCGCGTGGAGTCTTTACCGCCGGGAGTCGCTTCGGCCCCCGACGCTGTTTTATAA
PROTEIN sequence
Length: 427
MNFNDFTQRLSQVEARGIAIELAVLAACVALAWGVCKWFGRDQPKDSIWFGERTFDGVLFPLLALMLTDLARRAVIDFQTVLVLRIAVSMFLSLAVIRLFARVLRAVFPASNLVRLLERTVSWLAWIAAVLWIVGLLPPVLAELDDITLAFGKTRVSLQTIIQGVLSAGLVMVIALWISSTVEKRILREAVTDLSMRKVASNAVRAFLLLIGLLFALSAVGVDLTALSVLGGALGVGLGFGLQKLASNYVSGFVILLERSIRIGDNVKVDTFEGRITDIKTRYTLIRAGNGREAIVPNESLITSRVENLSLADRKFNITTTIVVGYESDVAQVQSILCEAAKAQPRVMTDPAPVAFLMNFAPDGLEFTLNFWVTDPDKGKDNLRSAINIAILDGLRGAGIDIPYPQRVVRVESLPPGVASAPDAVL*