ggKbase home page

SCNpilot_expt_500_bf_scaffold_24_27

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 50 / 51 ASCG 13 / 38 MC: 1
Location: 28447..31974

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2K9D5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 999.99
  • Bit_score: 2323
  • Evalue 0.0
  • rbh
Variovorax paradoxus strain MEDvA23 contig_46, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ29008.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 999.99
  • Bit_score: 2325
  • Evalue 0.0
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 999.99
  • Bit_score: 2314
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3528
ATGTCCATTCACGCCGCTCTCCACCACGTCACCCACTACAAGTACGACCGCCTGGTGCAGCTGGGCCCCCAGGTCGTGCGCTTGCGTCCCGCGCCGCATTGCCGCAGCAACGTCATCTCGTATTCGCTGCGGGTCGAGCCCGCCGAGCACTTCGTCAACTGGATGCAGGACCCGTTCGCCAACTACCAGGCGCGGCTGGTGTTCCCCGAGAAGACACGCGAGTTCAAGGTCACGGTCGACCTCGTGGTCGAGATGGCGGTCTACAACCCCTTCGACTTCTTCCTCGAGCCGCAGGCCGAGAACTTCCCCTTCAAGTACACGGCCTCGCAGGCCGAAGAGCTTGCGCCCTACCTCGTGGCCGATCCGGTCACGCCGCTGCTGGAGGCCTACCTGGACAAGGTCGACCGCAAGGAACAGCGCACCATCGACTTCCTGGTCGGCATCAACCAGCAGGTCCAGAAAGACGTCAACTACCTGATCCGCATGGAGCCCGGCGTGCAGACGCCGGAAGAAACGCTGACCAACGGCAGCGGCTCCTGCCGCGACTCGGGCTGGCTGCTGGTTCAGCTGCTGCGCCACTGCGGGCTGGCCGCGCGTTTCGTCTCGGGTTACCTGATCCAGCTCACCCCCGACGTGAAGGCGCTCGACGGCCCGAGCGGCACCACGGTCGACTTCACCGACCTGCACGCCTGGTGCGAGGTGTTCCTGCCGGGCGCGGGCTGGATCGGCCTCGACGCCACTTCGGGCCTCTTGGCCGGCGAAGGCCACATCCCGCTGGCCTGCACGCCCACGCCATCGAGCGCCGCGCCCATCGAGGGCGGCGTGGATGAATCCGAGGTCGAGTTCGGCCATGAGATGAAGGTCACGCGCATCTACGAATCGCCGCGCGTCACCAAGCCCTACACCGAAGAGCAATGGGCCGAGGTGCTGACCCTCGGCGACGCCGTCGATGCGCGCCTGAAGGCCGGCGACGTGCGGCTCACGATGGGCGGCGAGCCGACCTACGTGGCCACCAGCGACCGCGACGCGCCCGAATGGAACACCGACGCCCTCGGCCCCACCAAGCGCGGCTACGCCACCGAACTCGTTCACAAGCTGCGCGCCGAATACGGTAAGGGCGGCTTCCTGCATTTCGGCCAGGGCAAGTGGTATCCGGGCGAGCAACTGCCGCGCTGGGCACTGTCGATCTTCTGGCGCGCCGACGGCCAGACGCTGTGGCACGACCCCGACCTGTTCGCGGACGAACGCTTTCCCACCCACTACACCAGCGAAGACGCGCGCCGCTTCACCACCGTGCTGGCGCACAAGCTGGGCCTGACCGAGCGCTACATCCAGCCCGGCTACGAAGACATCTACTACTACCTCTGGCGCGAACGCCGCCTGCCGGTGAACGTCGACCCTTTCGACTCGAAGCTCGACGACGAACTCGAACGCGTGCGCCTGCGCCGCGTGTTCACGCAGAAGCTCGATGCGGTGATCGGCTACATGCTGCCCATCGAGCCCGGCAATGCGAACGGCGACGCGCCCGCGCTGGCAGGCCCGGCCTGGAAGACCGGCCCCTGGTTCCTGCGCGACGACCGGCTCTACCTGATCCCCGGCGATTCGCCCATGGGCTACCGCCTGCCGCTCGACTCGCAGCCTTGGGCCAGCAAGGGCGACTACCCCTACCTGATCGAGCGCGACCCGACGGCGCCGCGCGGCGCATTGCCCAGCGCGGCCGACTACCGCGCACGCTATGCCGTCTCCGCCCCGGGCAACGGCGGCGCGAACGGCACGGGCGCCAGCCTCGGCGACGTGCCCTATGCCTTCGGCACGCCGCCGGTGGTGCCCGCCTCGCTGCGCATGCAGTCGCCGGGCAGTGCCGGTGAAGGCGATGCGGCAGCCACAGCAGCCGACGGTGCGGCCGACCGGTCCGCCACCCGCCAGCCGTTGCGCGGCGAATCCGCCCACTGGGTCACGCGCACCGCGCTGTGCGTCGAAGTGCGCGACCCGCGCCGCGCCAACGGCCCCGCGGCCGAGAAGAAGGGCAATGCCTCCGGCGTGCTCTATGTCTTCATGCCGCCGCTCGCGCGGCTGGAGGACTACCTCGACCTCGTTGCCGCCGTGGAGGCCACCGCGCGCGACCTGGGCGTGCGCATCGTGATGGAAGGCTATCCGCCGCCGCGCGATCCGCGCCTGAAGATGCTGGCCGTCACGCCCGACCCCGGCGTGATCGAAGTCAACATCCACCCGGCCCACAACTGGAAGGAACTGGTCGCCCACACCGAGTTCCTCTACAACGCCGCATTCGAGACCCGCCTGTCGGCCGAGAAGTTCATGACCGACGGGCGCCACACCGGCACCGGCGGCGGCAACCACTTCGTGATGGGCGGCGCCACGCCCGCCGACAGCCCCTTCCTGCGCCGGCCCGAGCTGCTGGCCAGCCTGCTGCTCTATTGGCACAACCATCCGTCGCTGAGCTACCTTTTCTCGGGCATGTTCATCGGCCCGACCAGCCAGGCGCCGCGCGTGGACGAGGCCCGCAACGACCAGGTCTACGAGCTTGAAATTGCCCTGAAGGAAATCGCGAAGAACCGCGAGATCTACGGCCAGAACATGCCCGCGTGGCTGGTCGATCGCACGCTGCGCAACATCCTGATCGACGTGTCGGGCAACACGCACCGCAGCGAGTTCTGCATCGACAAGCTGTATTCGCCCGACTCCAGCACCGGCCGACTCGGCCTGCTGGAGCTGCGCGCCTTCGAGATGCCGCCGCATGCGCGCATGAGCATCGCGCAGCAGCTGCTCATCCGCGCGCTGGTGGCCCGCTTCTGGGACGAGCCCTACAAGGCGCCCGTCACCCGCTGGGGCACCGAGCTGCACGACCGCTTCCTGCTGCCGACCTTCGTCAAGATGGACTTCGACGACGTCATCAGCGAGATGCGCCAGGCCGGCTTCGCCTTCGATCCCGACTGGTTCGCGCCGCACTTCGAGTTCCGCTTCCCGCTGGTCGGCCAGATGCAGGCCATGGGCGTGGAACTGTCGCTGCGCAACGCGCTGGAGCCCTGGCACGTGATGGGCGAGGAAGGCTCGGCCGGCGGCACAGTGCGCTATGTCGATTCGTCGCTCGAGCGCATCGAAGTGCGCGTGACCGGGCTGAACGAAAGCCGCCATGTCGTCACCGTCAACGGCAAGGTGCTGCCGCTGCAACCCACCGGCGTGACGGGCGAATTCGTGGCCGGCGTGCGCTACAAGGCCTGGAACCCGCCCTCGGCGCTGCACCCCAGCATCAAGGCCCATGCGCCCCTGACCTTCGACCTGGTCGACACCTGGATGAAGCGTTCGCTGGGCGGCTGCCAGTATTTCGTCGCCCACCCGGGCGGGCGCAACTACGACACCTTCCCCGTCAACGCCTACGAGGCCGAGAGCCGCCGCCATTCGCGCTTCACGCGCACCGGCCACACGCCCGGACTCATGCGCACGCCGCCGGCCACCATCGAGCTGCCGGGCAGCCGCGAGTTTCCGTTCACGCTCGACCTGCGGCGCTGA
PROTEIN sequence
Length: 1176
MSIHAALHHVTHYKYDRLVQLGPQVVRLRPAPHCRSNVISYSLRVEPAEHFVNWMQDPFANYQARLVFPEKTREFKVTVDLVVEMAVYNPFDFFLEPQAENFPFKYTASQAEELAPYLVADPVTPLLEAYLDKVDRKEQRTIDFLVGINQQVQKDVNYLIRMEPGVQTPEETLTNGSGSCRDSGWLLVQLLRHCGLAARFVSGYLIQLTPDVKALDGPSGTTVDFTDLHAWCEVFLPGAGWIGLDATSGLLAGEGHIPLACTPTPSSAAPIEGGVDESEVEFGHEMKVTRIYESPRVTKPYTEEQWAEVLTLGDAVDARLKAGDVRLTMGGEPTYVATSDRDAPEWNTDALGPTKRGYATELVHKLRAEYGKGGFLHFGQGKWYPGEQLPRWALSIFWRADGQTLWHDPDLFADERFPTHYTSEDARRFTTVLAHKLGLTERYIQPGYEDIYYYLWRERRLPVNVDPFDSKLDDELERVRLRRVFTQKLDAVIGYMLPIEPGNANGDAPALAGPAWKTGPWFLRDDRLYLIPGDSPMGYRLPLDSQPWASKGDYPYLIERDPTAPRGALPSAADYRARYAVSAPGNGGANGTGASLGDVPYAFGTPPVVPASLRMQSPGSAGEGDAAATAADGAADRSATRQPLRGESAHWVTRTALCVEVRDPRRANGPAAEKKGNASGVLYVFMPPLARLEDYLDLVAAVEATARDLGVRIVMEGYPPPRDPRLKMLAVTPDPGVIEVNIHPAHNWKELVAHTEFLYNAAFETRLSAEKFMTDGRHTGTGGGNHFVMGGATPADSPFLRRPELLASLLLYWHNHPSLSYLFSGMFIGPTSQAPRVDEARNDQVYELEIALKEIAKNREIYGQNMPAWLVDRTLRNILIDVSGNTHRSEFCIDKLYSPDSSTGRLGLLELRAFEMPPHARMSIAQQLLIRALVARFWDEPYKAPVTRWGTELHDRFLLPTFVKMDFDDVISEMRQAGFAFDPDWFAPHFEFRFPLVGQMQAMGVELSLRNALEPWHVMGEEGSAGGTVRYVDSSLERIEVRVTGLNESRHVVTVNGKVLPLQPTGVTGEFVAGVRYKAWNPPSALHPSIKAHAPLTFDLVDTWMKRSLGGCQYFVAHPGGRNYDTFPVNAYEAESRRHSRFTRTGHTPGLMRTPPATIELPGSREFPFTLDLRR*