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SCNpilot_expt_500_bf_scaffold_209_3

Organism: SCNPILOT_EXPT_300_BF_Stenotrophomonas_69_97

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 1961..2965

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 322.0
  • Bit_score: 561
  • Evalue 6.70e-157
mraW; rRNA small subunit methyltransferase H (EC:2.1.1.199); K03438 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 327.0
  • Bit_score: 554
  • Evalue 1.80e-155
  • rbh
16S rRNA methyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000304D825 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 322.0
  • Bit_score: 562
  • Evalue 2.80e-157
  • rbh

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Taxonomy

Stenotrophomonas rhizophila → Stenotrophomonas → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
GTGAGCCGGGGTGCCCGGGTGCGCGGTCAAGCGCAGGCCGGTCACCCTCCGGTGTCGCAGCCGCCGGCGGCTCACCTGCCGGTGCTGTACACCCAGGTCCTGCAGGGCCTGAGGGTGATCGAGGACGGTACCTATCTGGACGGCACGTTCGGCCGTGGCGGCCACGCCGGCGGCGTGCTGCGCCAGCTCGGTCCCCATGGCCGCCTGCTGGTGATGGACAAGGATCCGGAGGCCATTGCCGTGGCCGAGCGCGATTTCGCGCCGGACCCGCGCGTGGCGATCCATCGCGGCAGCTTCGCCGACCTGCTGGACTGGAGCGAGACCGCCTCCGGGCTGGACGGCGTGCTGTTCGATCTGGGCGTGTCCTCGCCGCAGCTGGACGTGGCCGAGCGCGGTTTCAGCTTCGGCAAGGACGGCCCGCTGGACATGCGCATGGACCCGGATTCGGGCGAGAGCGCGGCGCAGTGGCTCAACCGCGCCGAGGAGCGCGAGATCGCCGACGTGCTGTGGACCTACGGCGAGGAGCGGCAGAGCCGCCGCATCGCCCGCGCGATCATCCAGTACCGCACCGCCAGGCAGCCGTTTTCGCGTACCGCCGAACTGGCCGAGCTGATCGCCTCGGTGATGCCGCGCGGCAAGGACAAGATCCACCCGGCCACGCGCAGCTTCCAGGCCATCCGCATCCACATCAACCGCGAACTGGCCGACCTCGAGGCCGGGCTGGACGCGGCGATGGCGCGGCTCAAGCCCGGTGGCCGGCTGGCGGTGATCAGCTTCCATTCGCTGGAAGACCGCATCGTCAAGCAGTTCATGAACCGCTATGCCAAGGCGCCGCCGAGCAACCGCCGGCTGCCGGAAGTGCAGGCCTTCGTGCCGACGCTGGACCTGGTCGGTGGCGCCATCAAGGCCGAGGACGACGAGCTGGCGGCCAACCCGCGTTCGCGCAGCGCGGTGCTGCGGGTGGCGGAAAAGCGCGCGCCGGCCACCGGGGGAGGCGCCGCATGA
PROTEIN sequence
Length: 335
VSRGARVRGQAQAGHPPVSQPPAAHLPVLYTQVLQGLRVIEDGTYLDGTFGRGGHAGGVLRQLGPHGRLLVMDKDPEAIAVAERDFAPDPRVAIHRGSFADLLDWSETASGLDGVLFDLGVSSPQLDVAERGFSFGKDGPLDMRMDPDSGESAAQWLNRAEEREIADVLWTYGEERQSRRIARAIIQYRTARQPFSRTAELAELIASVMPRGKDKIHPATRSFQAIRIHINRELADLEAGLDAAMARLKPGGRLAVISFHSLEDRIVKQFMNRYAKAPPSNRRLPEVQAFVPTLDLVGGAIKAEDDELAANPRSRSAVLRVAEKRAPATGGGAA*