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SCNpilot_expt_500_bf_scaffold_144_19

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: 25431..26801

Top 3 Functional Annotations

Value Algorithm Source
DNA repair protein radA n=1 Tax=Nitrosospira sp. APG3 RepID=M5DIX7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 456.0
  • Bit_score: 776
  • Evalue 1.70e-221
  • rbh
DNA repair protein radA {ECO:0000256|RuleBase:RU003555}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 456.0
  • Bit_score: 775
  • Evalue 3.10e-221
DNA repair protein RadA; K04485 DNA repair protein RadA/Sms similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 456.0
  • Bit_score: 761
  • Evalue 1.40e-217
  • rbh

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGAGTAAATCGAAGTCCACTTATTCCTGCAACGAATGCGGCGGCCAGACCTTGAAATGGCAGGGCCAGTGCCCGCATTGCCAGGCGTGGAACACCCTGGTCGAGATTATCTCCGAGAAAGCGGCTTCACGGTTCACGCTGGTGGCGGAAACGGGGGAAGTGCAGAATCTGGGCGAGCTGGAAGCAGGGGAAGAGCAGCGCTATTCCACTGGCATGGCAGAGTTCGACCGAGTGCTGGGCGGGGGACTGGTGCACGGCAGCGTGGTATTGCTCGGTGGAGATCCGGGTATCGGGAAATCCACGCTGCTGCTGCAAGCGCTTTGCCATATGTCGGGCAGCGCCCCGGGCGCCTTGAGTGCCCTGGGCGTCCTGTACGTCAGCGGCGAGGAATCGGCGCGCCAGGTTGCGTTGCGGGCACAGAGGCTGGCGCTCGACGCAAAAGCGGTCCATCTGCTACCGGAGATTCGGCTGGAAAGAATCCAGGGCATATTGCTGGAACGCAAGCCAGGCGTCGTGGTGGTCGATTCGATCCAGACCATTTATTCCGATGCATTGCAATCCGCGCCCGGCTCGGTTGCCCAGGTGAGGGAGTGCGCTGCGCAATTGACGCGGCTGGCGAAGGCCAGCGGCATAGCCATTGTGCTGGTAGGTCATGTGACCAAGGAAGGCGCGCTGGCGGGACCGCGCGTCCTGGAGCATATGGTGGATACCGTGCTGTATTTCGAAGGCGACACCCATTCGAGTTTTCGCCTGGTCCGTGCCGTCAAGAACCGCTTTGGCGCCGTGAATGAATTGGGCGTATTCGCGATGGGCGAGAAGGGGCTGCGGGAAGTGAGCAATCCTTCCGCGCTGTTTCTCTCCCACCATGGGGGTCAGGTGCCGGGCTCGTGTATCATGGTGACGCAGGAGGGCACCCGGCCGCTGCTGGTGGAGATCCAGGCGCTGGTGGATGAGGCCCATGCCCCGAATGCCCGCCGGCTGAGCGTAGGGCTGGAACAGAACCGGCTGGCCATGCTGCTGGCCGTGCTGCACCGCCACGCGGGTATCGCCTGTTTCGACCAGGATGTATTTGTCAATGCAGTCGGGGGAGTGAAAGTCACCGAACCCGGGGCTGATCTGGCAGTATTGCTGGCTATCGTGTCCTCTTTCAGGAACAAGCCGCTGCCGCACAAAATGGTGGTATTTGGCGAAGTCGGGTTGGCGGGAGAAGTGCGTCCGGTGCAGCGCGGGCAGGAGCGATTGAGGGAAGCGGCCAAGCTGGGTTTTGTCCAGGCCATCGTGCCCAGGGGCAACAAGCCCAGGCAGCCGTTTCCCGGCCTGGAGATCATCGCGGTAGAGCGGGTGGAAGATGCGGTGGCGGGAATACGTTAA
PROTEIN sequence
Length: 457
MSKSKSTYSCNECGGQTLKWQGQCPHCQAWNTLVEIISEKAASRFTLVAETGEVQNLGELEAGEEQRYSTGMAEFDRVLGGGLVHGSVVLLGGDPGIGKSTLLLQALCHMSGSAPGALSALGVLYVSGEESARQVALRAQRLALDAKAVHLLPEIRLERIQGILLERKPGVVVVDSIQTIYSDALQSAPGSVAQVRECAAQLTRLAKASGIAIVLVGHVTKEGALAGPRVLEHMVDTVLYFEGDTHSSFRLVRAVKNRFGAVNELGVFAMGEKGLREVSNPSALFLSHHGGQVPGSCIMVTQEGTRPLLVEIQALVDEAHAPNARRLSVGLEQNRLAMLLAVLHRHAGIACFDQDVFVNAVGGVKVTEPGADLAVLLAIVSSFRNKPLPHKMVVFGEVGLAGEVRPVQRGQERLREAAKLGFVQAIVPRGNKPRQPFPGLEIIAVERVEDAVAGIR*