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SCNpilot_expt_500_bf_scaffold_521_28

Organism: SCNPILOT_EXPT_300_BF_Nitrosospira_56_20

near complete RP 52 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(27075..27452)

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase cytochrome b-556 subunit n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJ66_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 125.0
  • Bit_score: 176
  • Evalue 1.60e-41
Succinate dehydrogenase {ECO:0000313|EMBL:KIO48583.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.2
  • Coverage: 125.0
  • Bit_score: 184
  • Evalue 1.10e-43
succinate dehydrogenase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit similarity KEGG
DB: KEGG
  • Identity: 69.6
  • Coverage: 125.0
  • Bit_score: 175
  • Evalue 8.70e-42

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Taxonomy

Nitrosospira sp. NpAV → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGCAAAGTGATCGCCCCAAATACCTCGACCTTCTCAAAATACGACAGCCCCTGCCGGCTGTAGTCTCATTTCTGCATCGGGTGAGCGGAGCGCTGCTTTTTTTTCCGGGAATCCCTCTCCTGCTTTGCGGGCTCGACATGGCTTTGAATTCTCCGCAGGATTATGCCCGATTACAATCTCTTCTGGACAATTCCCTGATCAAGGGACTTCTGACACTTCTGCTCTGGTTTTTTCTGCATCATTTCTTCGCCGGCATCCGCTTTCTCGCACTGGATCTCGGCTATGGCGGCGCGCTGAGGCAAGCGCGTGCGAGCAGCAAGGCGGTCCTTGCCGCAAGCATCCTGTTTACTGTGCTGGTTTCGATACGAGTATGGTGA
PROTEIN sequence
Length: 126
VQSDRPKYLDLLKIRQPLPAVVSFLHRVSGALLFFPGIPLLLCGLDMALNSPQDYARLQSLLDNSLIKGLLTLLLWFFLHHFFAGIRFLALDLGYGGALRQARASSKAVLAASILFTVLVSIRVW*