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SCNpilot_expt_500_bf_scaffold_206_25

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: comp(29184..30896)

Top 3 Functional Annotations

Value Algorithm Source
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB id=12496533 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 571.0
  • Bit_score: 1119
  • Evalue 0.0
  • rbh
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 571.0
  • Bit_score: 1019
  • Evalue 5.90e-295
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.5
  • Coverage: 571.0
  • Bit_score: 1019
  • Evalue 2.60e-294

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1713
ATGGCCGCTGTGACAAATAGCATCAATCTAACCGGGCTGGCGCGCGCCATGGTCAACCATGGCTGGCTGTCCGAAAACGATGCCGAAGGCGTCTGGAAACGCGCCGCCCAGGCGGGCGACTCTTTCGTCACCGAACTGATCCGGGGCAAGCGTTTCAAGGCCGAGCAGATCGCTGAGTTTGCGGCCGTCTCCTTCGGTTATCCCTTCATGGATCTGGCCGCGATGGATCCCGAGAGCCTGCCGCAGGGGCTGCTCGACCCCAGGCTGATGCAGAAACGCCGCGTGGTGGCGCTCTATCAGCGGGGCAACAAACTGTATGTCGGCACGTCCGACCCGACCCAGCTGCAGGCGCTGGATGAAGTCAAATTCCAGACCGGACAGACTGTCGAGCCGGTCGTGGTCGAAGACGACAAACTCGGCAAGCTTATCGAGAAAGTGGGCGAGGCGGCGGACAACACGCTGGCCGTGCTCAACGCCGAGGACCTCAACCTCGATTTCGCCGACGAGGAAACGAGCAGCCAGCCGGACGCCGGCGGTATCGAGATCGACGATGCACCGGTGGTGCGCTACCTGCAGAAGATCATGCTCGACGCGATCAACGCCGGCGCGTCCGACATCCACTTCGAACCCTACGAGAAGTTCTACCGCATCCGCTACCGCCGCGACGGCATCCTGTACGAAGTGGCGCAGCCGCCGATGGCGATCAAGGACAAGGTCGCATCGCGCATCAAGGTGCTGTCGCGCCTGGATATCGCAGAAAAACGCGTGCCGCAGGACGGCCGGATGAAGATGGTGCTGTCGAAGACGCGTGCGATCGACTTCCGGGTCAGCACGCTGCCCACGCTCTACGGCGAAAAGATCGTCATGCGGATTCTCGATCCGTCGAGTGCGCAGCTCGGGATCGAGGCGCTGGGCTACGAGCCCTGGCAGAAAGAGGCGCTGCTGGCTGCCGTGCAGCGCCCCTACGGCATGGTACTGGTCACCGGCCCCACCGGTTCCGGTAAAACCGTGTCGCTCTACACCTGCCTCAATATCCTCAACAAGCCCGACGTCAACATTTCCACTGCGGAAGATCCGGCGGAAATCCAGCTGCCGGGCATCAACCAGGTCAACGTCAACGACAAGGCCGGCCTCACATTCTCGGCCGCGCTCAAATCCTTCCTGCGCCAGGATCCGGACGTGATCATGGTCGGCGAAATCCGCGACCTGGAAACGGCGGACATCGCCATCAAGGCTGCGCAGACCGGCCACATGGTGATGTCGACCCTGCACACCAACGATGCGCCGGGCACGCTGACCCGCCTGCTCAATATGGGTGTCGCGCCGTTCAACGTGGCTTCGTCGGTGATCCTCATCACCGCGCAGCGCCTTGGACGCCGGCTGTGCGGCTGCAAGCAGCCGGTGGACATGCCGCGCGAAACCCTGCTGGCAGCCGGATTCAACGATGACCAGCTCGACGGCACCTGGAAGCCCTACAAGCCGGTCGGATGCGAAATCTGCGGCGGCACCGGCTACAAGGGGCGGGTCGGTATCTATCAGGTCATGCCGATCACCGACGCCATGACGCGCATCATCCTCAAGGGCGGCAACGAAGCCGATATCGCCGACCAGGCCCGCCGCGAAGGCGTGCTCGACCTGCGGCAGGCCGGCCTGCTCAAGGTCAAGGCCGGTCTGACCTCGCTGGAAGAGGTCGAGGCCGTCACCAACATCTAA
PROTEIN sequence
Length: 571
MAAVTNSINLTGLARAMVNHGWLSENDAEGVWKRAAQAGDSFVTELIRGKRFKAEQIAEFAAVSFGYPFMDLAAMDPESLPQGLLDPRLMQKRRVVALYQRGNKLYVGTSDPTQLQALDEVKFQTGQTVEPVVVEDDKLGKLIEKVGEAADNTLAVLNAEDLNLDFADEETSSQPDAGGIEIDDAPVVRYLQKIMLDAINAGASDIHFEPYEKFYRIRYRRDGILYEVAQPPMAIKDKVASRIKVLSRLDIAEKRVPQDGRMKMVLSKTRAIDFRVSTLPTLYGEKIVMRILDPSSAQLGIEALGYEPWQKEALLAAVQRPYGMVLVTGPTGSGKTVSLYTCLNILNKPDVNISTAEDPAEIQLPGINQVNVNDKAGLTFSAALKSFLRQDPDVIMVGEIRDLETADIAIKAAQTGHMVMSTLHTNDAPGTLTRLLNMGVAPFNVASSVILITAQRLGRRLCGCKQPVDMPRETLLAAGFNDDQLDGTWKPYKPVGCEICGGTGYKGRVGIYQVMPITDAMTRIILKGGNEADIADQARREGVLDLRQAGLLKVKAGLTSLEEVEAVTNI*