ggKbase home page

SCNpilot_expt_500_bf_scaffold_206_43

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN2_64_69

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 MC: 3 ASCG 12 / 38
Location: 43509..43721

Top 3 Functional Annotations

Value Algorithm Source
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 id=12496515 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 71.0
  • Bit_score: 141
  • Evalue 3.30e-31
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21 similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 70.0
  • Bit_score: 136
  • Evalue 4.30e-30
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 71.0
  • Bit_score: 138
  • Evalue 3.90e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 213
ATGCCGCACATCAAAGTCAAGGAAAATGAGCCGTTCGACGTCGCGCTGCGCCGCTTCAAACGCTCCATCGAAAAAGTCGGCCTGCTGACCGAACTGCGCGCCCGCGAGTTCTACGAAAAGCCGACCGCCGAACGCAAGCGCAAGCTCGCTGCCGCCGTCAAGCGCCAGAACAAGCGCCTGCGTGGCCAGCAACTCCCGCCCAAGCTTTACTGA
PROTEIN sequence
Length: 71
MPHIKVKENEPFDVALRRFKRSIEKVGLLTELRAREFYEKPTAERKRKLAAAVKRQNKRLRGQQLPPKLY*