ggKbase home page

SCNpilot_expt_500_bf_scaffold_210_22

Organism: SCNPILOT_CONT_300_BF_Microbacterium_72_41

near complete RP 51 / 55 MC: 4 BSCG 50 / 51 MC: 2 ASCG 12 / 38
Location: 22085..22663

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003450061 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 192.0
  • Bit_score: 356
  • Evalue 1.30e-95
  • rbh
Transcriptional regulator {ECO:0000313|EMBL:KEP75442.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 192.0
  • Bit_score: 332
  • Evalue 3.80e-88
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 86.5
  • Coverage: 192.0
  • Bit_score: 330
  • Evalue 3.20e-88
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium sp. SUBG005 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
ATGGGCAGGATGCCGACATTCGACCGTCGCGCGGTGATCGACGCTGCGCGCGACGTGTTCTGGCAGCGCGGGTACGCCGAGGCCGGCATCACCGAACTCGAAGACGCGACCGGACTCACGCGGTCGAGCATCTACAACGCCTTCGGCAGCAAGCGCGGCCTCTTCGACGCGGTCCTCGCGGCGTATCTCGACGATGTCGTGCGCACGCGCCTGCGTCCTCTCGGCGGGGGAGACCCCGGCGCGCTCGAGGCGTACATCGAGGACATGCGCGCCGCCATCGAAGCCGACTCCCCGCGCGCGCGCCTCGGCTGCCTGCTGCTCAACGCCGGGTCGTCGCCGCTCGCGTCGGACGACGCCGAGGTCCGCACCCTCGTGTCGGGGTACGCCGCCGAGATGCGATCCGCGATCCGCGCGGCCGTGGCCGACCGGCGTCCCGACCTCGCCCCGGATGCCGTGGACTCCCTCTCCGCCGTGTGCGCGTCGCTCGTGGTGGCGGCGCTGACCCTCGCCCGCGCCGACCGCGACGCGGCCGTGGCGACGCTGGCATCCGTTCCGGCGACGCTGGAGTCCTGGGGGTAG
PROTEIN sequence
Length: 193
MGRMPTFDRRAVIDAARDVFWQRGYAEAGITELEDATGLTRSSIYNAFGSKRGLFDAVLAAYLDDVVRTRLRPLGGGDPGALEAYIEDMRAAIEADSPRARLGCLLLNAGSSPLASDDAEVRTLVSGYAAEMRSAIRAAVADRRPDLAPDAVDSLSAVCASLVVAALTLARADRDAAVATLASVPATLESWG*