ggKbase home page

SCNpilot_expt_500_bf_scaffold_1332_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(3..1187)

Top 3 Functional Annotations

Value Algorithm Source
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase id=12495513 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 395.0
  • Bit_score: 784
  • Evalue 4.10e-224
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 395.0
  • Bit_score: 698
  • Evalue 1.60e-198
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.9
  • Coverage: 395.0
  • Bit_score: 748
  • Evalue 4.60e-213

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGTCAGACCATCCCATCGAATCCGCTCCGCCACGCACGACGGTCAGTCCCTTTCCGGTGCGCTCCCGGCTCCTGGTAGTGGATGACGAGCCATTGATTCTGGAAGGGCTGACGCGCTTGCTGGCCACCCGTGATTACGACGTGGTGACCGCCAACGGGGGCTGCGATGCGCTGATCGCCATCGGCAAGCAGCAGTTCGATGCCATCCTGCTCGACCTCGGCATGCCGGACCTCAACGGCAACGAAGTCCTGCGTTTCGTGGCCGACCGCAGCGCCGACACGCCGGTCATCGTGGTGTCGGGCGACAGCACCATCGACGCGGCGATTCGCGCGCTGCGCGGGGGAGCCGCCGACTTTGTACGCAAACCCTACGAACCCGAGGAACTGCTGCGCCGCATCGACAACACGCTGACGCGGCGGCGGCTGGAAAAGGAAAACAATCACATCCTGCAGCGTCTCCAGCAGTCGGAAAAGTGGCACCGCTTCCTGGTCAACAGCTCGCCCGATTTCATCTACACGCTCGACAGCGATGGCCGTTTTACTTTCGTCAACGACCGCGTCGAAAGCCTGCTCGGCTACCGCAGCGAGGAACTGCTGAGCCAGCATTACAGCCTGGTGATCCACGAGGACGACATCGCGCGGGCCGAGCACGTGTTCAACGAGCGCCGCGCGGGCGACCGCAACGCGCGCAATATCGAAATCCGGCTCAAGTGCAATCCGGGGATGCGCCGCCCGCGCCTGATGAACGGCCGCTGCAAGGCGGTCGAACTCACCGCGACCGGCATGTACGACGAGACGGCGGGTCCGTTCGACAAGCGTTTCATCGGCAGCTACGGCGTCGCCAAGGACATCACCGAACGCAAGCAGGCCGAGGAAACCGTGCATTACCAGGCCTACCACGACCTGCTCACCGGCCTGCCCAACCGTGCGCTGTTCCGTGATCATCTCGGCCTCATGCTGGCGCAGGCCCGGCGCAACCAGCAGCCGCTGGCGGTGCTGAGCCTCGACCTCGACCATTTCAAGGTCATCAACGATTCGCTCGGCCACACCGTCGGCGACGAACTGCTGCTGGCCGTCGGCGCGCGTCTGCGCCAGTGCCTGCGCGAGGGCGATACCCTGGCGCGCCTGGGCGGCGACGAATTCGCCGTGCTGCTGCCCACCCTGGTGTCGCGCAGCGACGTCGAG
PROTEIN sequence
Length: 395
MSDHPIESAPPRTTVSPFPVRSRLLVVDDEPLILEGLTRLLATRDYDVVTANGGCDALIAIGKQQFDAILLDLGMPDLNGNEVLRFVADRSADTPVIVVSGDSTIDAAIRALRGGAADFVRKPYEPEELLRRIDNTLTRRRLEKENNHILQRLQQSEKWHRFLVNSSPDFIYTLDSDGRFTFVNDRVESLLGYRSEELLSQHYSLVIHEDDIARAEHVFNERRAGDRNARNIEIRLKCNPGMRRPRLMNGRCKAVELTATGMYDETAGPFDKRFIGSYGVAKDITERKQAEETVHYQAYHDLLTGLPNRALFRDHLGLMLAQARRNQQPLAVLSLDLDHFKVINDSLGHTVGDELLLAVGARLRQCLREGDTLARLGGDEFAVLLPTLVSRSDVE