ggKbase home page

SCNpilot_expt_500_bf_scaffold_2385_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(3..1502)

Top 3 Functional Annotations

Value Algorithm Source
patatin; K07001 NTE family protein id=12494944 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 500.0
  • Bit_score: 975
  • Evalue 2.70e-281
  • rbh
patatin; K07001 NTE family protein similarity KEGG
DB: KEGG
  • Identity: 46.0
  • Coverage: 467.0
  • Bit_score: 412
  • Evalue 1.70e-112
  • rbh
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.5
  • Coverage: 461.0
  • Bit_score: 438
  • Evalue 1.30e-119

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RifOxyA12_full_Lentisphaerae_48_11_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1500
ATGTGCCTGACCGCTAACGTCTGCCCCCTCATCCGCCTCGTGGCGCGCGCGTTGCCGGACATATCGGGTATGTACCCTGAATCATGCCGCAGCGGCTTTCGCCAACTGGCATATACGGCACAGACCACGTACCGGGCGGGCTTTCGGAAATGGGTGCTGCTGGCCTGCGCCCTGTCGTTTGCGGGCTGCGCGCATTACCCGCCAAACCAACCCCTGGCGCGGCACGATCCGGCGTATGGCTATCGTTTTACCAATCTCACCAGTCCTGACGAGCGCGACGACATGCTGGTCGTCGTCACCTTCTCGGGCGGCGGTACGCGCGCTGCCGCTCTGGCCTACGGTGTGCTTGAGCACCTCGCCCACACTGAAATCGTCCGGAACGGGAAGCCCGAGCGCCTGCTCGACGAAGTCGATATCCTGTCCTCAGTGTCCGGTGGGAGCTTTACTGCCGCCTACTATGCGCTTTATGGTGAGCAGATTTTCAGCGATTTCGAGCACCGCTTCCTGAAGCGCAATGTTCAAGGCGAACTGACCCGCAAGCTGCTTGCCCCGGTCAATCTGGCGCGTGTCTCGTCGCCGCTATTTGGCAGGATCGATCTGGTAGCCGAATACTTCGACGACGAGATTTTCGATCATGCCACTTTTGGCGATCTGGTCGAGAAGGGACGGCGCCCCTTCGTGATGATCAACGCCAGCGACATGTCGCTGGGTACGCGTTTCGAATTCACTCAGGATCAGTTCGATCTGCTCTGCTCCGATCTTTCTTCGTTTCCGCTGGCGCGCGCAGTGGCGGCTTCAAGTGCCGTGCCGATCGTGTTTAGCCCCCTTACCGTCAGAAACTACGGTGGCACGTGCGGCTATCCTGGCCCGATACACGTTGCCGGATCTTCCGGTGGGGCGACCGCACGGCAGATATATAAAGCCGCCGAGGTGCGTTCCTATCTCGATTCCGCAGCCAGACCCTACCTGCATCTACTGGATGGGGGTATCACCGACAATATCGGCTTGCGCGGGATGCTGGATCGGGTGGCTTCCGGCGACGGGCCGCAGGCGCTCGCCCGCGCCATGCGCCTCGAACGGCTTCGCAAGGCGGTGCTGATCGTCGTCAATGCCGAGACCGCTCCGGACCTGTCTCTGGATCGAAGCGAGGTGGTGCCGACCGTCACTCAGGTCTTCAGGGCGGTCAAGGATATCCCGATCAACCGCTATTCGTTTGAAACGATCGAGCTTCTCAAGACCAATTTTGAGGATTGGGCCAGGCAGATACGTAAACAGAATGATGAGAAGCAAACAGTCGGTGGGGCGGAAGCCGGGTTTGATTTTTATCTGATCGAAGTCACCTTCGACGCGATCAAGGATCCTGCCGAGCGCGATTTCTTTCGTGGCATTCCAACTTCGTATACATTGCCCGCGGAAACCGTGGACCAACTACGTGCGTTGGGACCACGATTGATTGAGGAATCAGGCGACTATCAAAGATTGCTGCATGATCTGCAGCGT
PROTEIN sequence
Length: 500
MCLTANVCPLIRLVARALPDISGMYPESCRSGFRQLAYTAQTTYRAGFRKWVLLACALSFAGCAHYPPNQPLARHDPAYGYRFTNLTSPDERDDMLVVVTFSGGGTRAAALAYGVLEHLAHTEIVRNGKPERLLDEVDILSSVSGGSFTAAYYALYGEQIFSDFEHRFLKRNVQGELTRKLLAPVNLARVSSPLFGRIDLVAEYFDDEIFDHATFGDLVEKGRRPFVMINASDMSLGTRFEFTQDQFDLLCSDLSSFPLARAVAASSAVPIVFSPLTVRNYGGTCGYPGPIHVAGSSGGATARQIYKAAEVRSYLDSAARPYLHLLDGGITDNIGLRGMLDRVASGDGPQALARAMRLERLRKAVLIVVNAETAPDLSLDRSEVVPTVTQVFRAVKDIPINRYSFETIELLKTNFEDWARQIRKQNDEKQTVGGAEAGFDFYLIEVTFDAIKDPAERDFFRGIPTSYTLPAETVDQLRALGPRLIEESGDYQRLLHDLQR