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SCNpilot_expt_500_bf_scaffold_2385_4

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2616..4016)

Top 3 Functional Annotations

Value Algorithm Source
putative exonuclease of the beta-lactamase fold involved in RNA processing id=12494942 bin=THIO_HI species=Rhodanobacter thiooxydans genus=Rhodanobacter taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 436.0
  • Bit_score: 864
  • Evalue 3.70e-248
  • rbh
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:EIM02950.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.9
  • Coverage: 464.0
  • Bit_score: 663
  • Evalue 1.70e-187
putative exonuclease of the beta-lactamase fold involved in RNA processing similarity KEGG
DB: KEGG
  • Identity: 70.3
  • Coverage: 464.0
  • Bit_score: 649
  • Evalue 5.90e-184

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
GTGAACGTTACATTCCTTGGGGCAGCGCGCGAGGTCACGGGATCGTGCTATGTGATCGAGACCGGAACGACCCGATTCATGGTGGATTGCGGCATGTTTCAGGGCGGGCGCGAGGCTCCGGCACGCAATCGCCGGCCATTTGATCTTGATCCGAAGGCGGTCGATTTCGTGCTGCTCACGCATGCCCATATCGATCACAGCGGCCTGTTGCCGAAGCTCGTGAACGAGGGATTTAAAGGCCCGATTCACGCCACCTGGGCCACTATTGACTTGCTCGGTGTGATGCTGCCGGATAGTGGCCACATCCAGGAAGTCGAGGCTGCGCGCGCCTTGCGTAAACAGAAAAACAGCAAGCGTATCGGCGCCGCCGCGACCCCGCTGTATACCGTGCAGGACGCCATGGACTGTCTGCAACAATTGAGTCCGCACGCGTATGACGAATGGCTGGTGCCGCATCCCGGTATCCGCTGCCGTTTCCACGATGCCGGGCATATCCTCGGCTCGGCGATCATAGAAATTCAGGTCAGCGAGGGCAGCAGGACCACGACCCTGGTCTTTTCCGGCGACCTCGGCCAGCCGGGGCGGCCGATCCTGCGCGACCCGAGCGTGATCGCGGCAGCGGACGTGCTGTTCATCGAATCAACCTACGGCGACCGCATGCACAAGGAACTGCCGGCGACACTGGAGGAACTGGCCGGGGTGATCGAGCACACACTGGAGTCCCGGCGCGGCAACGTCATCATTCCCGCGTTCGCGGTCGGGCGTACCCAGGAAATTATCTATTCTTTGCACCAGTTGACGCGTCAAGGGCGGCTGCGCGATCTCAACATCTTCGTCGATTCACCGATGGCCACGGCCGCAACCCGGATCACCATGCAACATCTGGCCCTGTTTGATGAAGAGGCCCGCCGGTTGGCCGACTGGCGCGCGGCGGGCGGCAGCCTGCCGTATCTGAAGTTTGTCGGCAGCGTGGACGAGTCGATGGCGCTTAACCGGATTCGTTCCGGCGCCATCATCATTTCCGCGAGCGGCATGTGCGATGCCGGCCGCATCAAACACCATCTGCGTCATAACCTCGGACGTTCCGAATGCAGCGTGCTGATCACCGGTTTCCAGGCGCAGGGAACACTGGGGCGGCGGCTGGTCGACGGCGCCCGACGCGTGCGTCTCCTCGGCGAGGAAATCAGCGTACGTGCCTCGATTCATACCCTTGGCGGCTTCTCGGCGCACGCCGATCAGCGGGCGCTGCTCAACTGGGCCGACGGATTCCGGCAGCCGCCGCGGCAGGTATTCGTGGTGCACGGCGAGGAAACGGCAGCACTCGCGCTCGCCCATCGCCTGCAAACCGACAAGGGCTGGACAGTGAGTGTGCCCGAGCCGGGTCAGAGTGTGACCTTGTAA
PROTEIN sequence
Length: 467
VNVTFLGAAREVTGSCYVIETGTTRFMVDCGMFQGGREAPARNRRPFDLDPKAVDFVLLTHAHIDHSGLLPKLVNEGFKGPIHATWATIDLLGVMLPDSGHIQEVEAARALRKQKNSKRIGAAATPLYTVQDAMDCLQQLSPHAYDEWLVPHPGIRCRFHDAGHILGSAIIEIQVSEGSRTTTLVFSGDLGQPGRPILRDPSVIAAADVLFIESTYGDRMHKELPATLEELAGVIEHTLESRRGNVIIPAFAVGRTQEIIYSLHQLTRQGRLRDLNIFVDSPMATAATRITMQHLALFDEEARRLADWRAAGGSLPYLKFVGSVDESMALNRIRSGAIIISASGMCDAGRIKHHLRHNLGRSECSVLITGFQAQGTLGRRLVDGARRVRLLGEEISVRASIHTLGGFSAHADQRALLNWADGFRQPPRQVFVVHGEETAALALAHRLQTDKGWTVSVPEPGQSVTL*