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SCNpilot_expt_500_bf_scaffold_3604_9

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(7160..8992)

Top 3 Functional Annotations

Value Algorithm Source
mnmC, trmC, yfcK; 5-methylaminomethyl-2-thiouridine methyltransferase; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] id=12494664 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 611.0
  • Bit_score: 1234
  • Evalue 0.0
  • rbh
mnmC, trmC, yfcK; 5-methylaminomethyl-2-thiouridine methyltransferase; K15461 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 615.0
  • Bit_score: 892
  • Evalue 8.90e-257
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC {ECO:0000255|HAMAP-Rule:MF_01102}; Short=tRNA mnm(5)s(2)U biosynthesis bifunctional protein {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; tRNA (mnm(5)s(2)U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=2.1.1.61 {ECO:0000255|HAMAP-Rule:MF_01102};; Includes:; FAD-dependent cmnm(5)s(2)U34 oxidoreductase {ECO:0000255|HAMAP-Rule:MF_01102}; EC=1.5.-.- {ECO:0000255|HAMAP-Rule:MF_01102};; TaxID=292415 species="Bacteria; Prot similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 615.0
  • Bit_score: 892
  • Evalue 4.00e-256

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1833
ATGCTCAAAACCATCGTCCCCGCCCGCCTCGAATTCAGGCACGGCGTGCCGTATTCCGCCGCCTACGGCGATGTCTACCATTCTGCGGACGGCGGCACGGGTCAGGCACGTCATGTATTTTTGCAGGGCTGTGGATTGCCGCAGACCTGGGCACATCGTGAACGCTGCACGGTGCTGGAAACGGGATTCGGTACGGGGCTGAATTTTCTGGCGACCTGGGCGGCCTGGCGCGACGATCCGGCGCGTTGTGCGCGGCTGCATTTTCTGTCGGTCGAGAAACACCCGTTTCAGGTTGAAGATCTGGCGCGGCTGCATGGGAAATGGCCAGAATTTGCGCCATTATCGGAGGAACTGCTGGCGAACTGGCCGATGCTGACACCCGGTTTCCACCGGATCGCGCTCGACGGCGGGCGGGTGCAGCTCACCCTGATGCTTGGCGATGCGCTCGACTGCCTGCCGCAGTTGCACGCCAGCGTGGATGCCTTGTATCTCGACGGTTTCGCGCCCGACCGCAATGCCGATCTGTGGCAGCCGGCACTGTTCGACGCGCTGGCGCCATTGGTCCGCCCCGGCGCGATGGCCGCGACCTACACCGTAGCGGCGTCGGTACGCGAAAACCTGGGACGGATCGGTTTCGTCTGCGAAAAGCGGGCGGGCTACGGCCGCAAACGGCATTGTCTGAGCGCCTGTTTCCAGGAGACCAGCCGCCCGATCGAGCCCACTGTGCCGCGCCATGTTGCGGTCGTCGGCGCCGGCGTGGCGGGCGCTGCCGTGGCGCATGCCCTGGCGCGGCGCGGCACGGCGGTCACGGTGCTGGAGCGTGCCGCCTTACCGGCGCAGGCGGCCTCGGGCAATCCGGTGGCGGTATTCCGGCCGCTGATCTCGCGCGACGACAACCCGTCTGCCCGCCTGACGCGGGCGGCATTCCTGCACGACCTGCGCGCCTGGGCCGGACTGGGCGAATCCGTGGAATGGGCGCGTTGCGGCGTGTTGCATCTGGCGAAGGATGCGGAGGCCGTCGCCAGACTGCGGCAGGGGCTGAGCGCCACCGCGCCGCCGGCCGGTTATGCGCACTGGGTGGATCTGGATGAGGCGCGCGAGTTGGCGAACTGGCCTGTCACGATGCCCGGCGTGTATTTCCCCGCGGCGGGCTGGGTGGTGCCGGAGAGCCTGTGCCGGGCCTGGCTCGATCATCCCGCCATTCGCGTACAGACCGGTTGTGCCGTGACGCGGGTCGAGGCCGGGGCAGCGGGGTGGCAAGTCGTGAATCAGGCGGGTGCGATCGTGGCCGAGGCCGAGGCCGTGGTGCTGGCGAACGCGCGCGACGCCCTCGGCCTGGCGCCCGGACAGCGCTGGCCGCTCCATACCGTGCGCGGCCAGATCACGCGCCTGCCGCCCGGCAGCCTGCCGGAGATCCGGCGGGTGATTGCGCGTGAAGGCTATGTGGCGCCGGGCACCCTGAAGGGCACAAGCGCACGACCGCTGGTGGGGGCCACGTATGAACATGACGACGACGAGACGGCGCCGCGCACGGCAAGCGATCTCGCCAACCTGGCCCGGCTGGAGGCGATTCTGCCAGGTGCGGGCGAGCGGCTGGCGGGCGAAGTGAACGGTCGCGCCTCGTTGCGCGCCACCCTGCCTGACCGGCTGCCGCTGGTGGGCGCGGTCGGCGGGCAGACGGGCCTGTATGTCGCCGCAGGCTATGCCTCGCGCGGGGTCGTGTGGGCGGGGATATTGGGCGAGGCGCTGGCCGACCGGATGACAGGCCAGCCCTGGCCGCTGGAAACCGGATTGATGCAGGCGATCGCGCCGGAGCGGTTCTGTCGGCCGTAG
PROTEIN sequence
Length: 611
MLKTIVPARLEFRHGVPYSAAYGDVYHSADGGTGQARHVFLQGCGLPQTWAHRERCTVLETGFGTGLNFLATWAAWRDDPARCARLHFLSVEKHPFQVEDLARLHGKWPEFAPLSEELLANWPMLTPGFHRIALDGGRVQLTLMLGDALDCLPQLHASVDALYLDGFAPDRNADLWQPALFDALAPLVRPGAMAATYTVAASVRENLGRIGFVCEKRAGYGRKRHCLSACFQETSRPIEPTVPRHVAVVGAGVAGAAVAHALARRGTAVTVLERAALPAQAASGNPVAVFRPLISRDDNPSARLTRAAFLHDLRAWAGLGESVEWARCGVLHLAKDAEAVARLRQGLSATAPPAGYAHWVDLDEARELANWPVTMPGVYFPAAGWVVPESLCRAWLDHPAIRVQTGCAVTRVEAGAAGWQVVNQAGAIVAEAEAVVLANARDALGLAPGQRWPLHTVRGQITRLPPGSLPEIRRVIAREGYVAPGTLKGTSARPLVGATYEHDDDETAPRTASDLANLARLEAILPGAGERLAGEVNGRASLRATLPDRLPLVGAVGGQTGLYVAAGYASRGVVWAGILGEALADRMTGQPWPLETGLMQAIAPERFCRP*