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SCNpilot_expt_500_bf_scaffold_4261_8

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 4433..4720

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator id=12495552 bin=THIO_HI species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 96.0
  • Bit_score: 178
  • Evalue 4.30e-42
XRE family transcriptional regulator {ECO:0000313|EMBL:KHL68640.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.3
  • Coverage: 95.0
  • Bit_score: 155
  • Evalue 4.20e-35
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 94.0
  • Bit_score: 122
  • Evalue 8.70e-26

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Taxonomy

Serpens flexibilis → Serpens → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 288
ATGTTGACGCATGAACAATTGGTAGCCCGGATGCTCAAGAATCCGGCGGTACGTACCGAACACGAGCGGCTCGAACGCGAGGAATTTGCCCTGCTCGACGAGATGCTTGCCGCGCGGCGAGCCGCTGGGCTCACGCAGGCGCAGGTCGCCGAACGGATGGGGACCAAAGCCCCCGCTGTGGCGAGGCTGGAGAACGCACTGGCTTCCTGCAAGTACTCGCCCAGCCTGGATACGCTGCGCAAATACGCCAAGGCGCTGGGCAAACGGGTAGAGGTGCATCTGGTTTGA
PROTEIN sequence
Length: 96
MLTHEQLVARMLKNPAVRTEHERLEREEFALLDEMLAARRAAGLTQAQVAERMGTKAPAVARLENALASCKYSPSLDTLRKYAKALGKRVEVHLV*