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SCNpilot_expt_500_bf_scaffold_7909_2

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(1300..1887)

Top 3 Functional Annotations

Value Algorithm Source
MarR family transcriptional regulator id=12494530 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 196.0
  • Bit_score: 380
  • Evalue 1.20e-102
  • rbh
MarR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 189.0
  • Bit_score: 351
  • Evalue 1.40e-94
  • rbh
Transcriptional Regulator, MarR family {ECO:0000313|EMBL:AAZ96181.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 189.0
  • Bit_score: 351
  • Evalue 6.20e-94

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Taxonomy

Thiobacillus denitrificans → Thiobacillus → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
TTGAAAAGCCAGGCGCTTACCCTGTTCGATCTGGTCGAGCGGCTGTCGCTGCTGACCCGGGCCGACTTGCGGCAGGCGGGCGCGGCGCAGGGCCTGCAGCCGGTGCACCTGCAGGTGCTGTTCTACCTGAACCAGGCCAATCGTTTCAGCAACACGCCGCAGGCGCTGACCGAATATCTCGGCCTGACCAAGGGCACGGTGTCGCAGACCGTGCTGGTACTGGCGCGCCGTCGCCTGATTTCGCGTTATGCCGATCCACGCGATGGCCGGGTGGTGCGATTGATCCTGACCGAAGGTGGCACCACCCTGCTGAAAACCCTGAGCGCAGGCAGCGCCTGGCGGGATATCGTGCAGACGGCGAGCCCGGCGCGGGTGACGTCGGCGATGGTGGTGCTGCGGCAGGTGCTGGCGCAGGTGCAGGCGCAAAGCGGCAAGCGCAGCTTCGGTGTGTGCGCGACCTGTCGCTACAACCAGCGGCTGGGACCGCGCAGTTATTTTTGCGGGTTGAAACAGGAAAAGCTCAGCAGTCCCGAAGTGCGGCGGATCTGCCGCGAACACGCCCCGCCGGTGGTATCGGAGCCGGCTTAA
PROTEIN sequence
Length: 196
LKSQALTLFDLVERLSLLTRADLRQAGAAQGLQPVHLQVLFYLNQANRFSNTPQALTEYLGLTKGTVSQTVLVLARRRLISRYADPRDGRVVRLILTEGGTTLLKTLSAGSAWRDIVQTASPARVTSAMVVLRQVLAQVQAQSGKRSFGVCATCRYNQRLGPRSYFCGLKQEKLSSPEVRRICREHAPPVVSEPA*