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SCNpilot_expt_500_bf_scaffold_7909_4

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2365..3609

Top 3 Functional Annotations

Value Algorithm Source
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=12494532 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.8
  • Coverage: 415.0
  • Bit_score: 804
  • Evalue 6.90e-230
  • rbh
diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 413.0
  • Bit_score: 671
  • Evalue 1.30e-190
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 413.0
  • Bit_score: 720
  • Evalue 1.40e-204

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
TTGAACACTTTGCATCGCATCGACGGCCGCCTCCATCTTGAGGACGTGGCGCTGGACACGCTTGCCGAACGTTTCGGCACACCCCTTTATGTCTATTCCCGGCAGGCGCTTGAGACCGCCTACCAGGATTACAGCCGGGCATTTGCGAGTATTCCGCACCTGATCTGCTATGCGGTCAAGGCCAATTCCAGCCTGGCCATTCTCAACCTGTTCGCCCGGCTCGGCGCCGGCTTCGACATCGTCTCGGGCGGCGAACTGGCCCGCGTACTGGCCGCCGGCGGAGATCCGGGCAAAATCGTGTTCTCGGGTGTCGGCAAGACCGCAGACGAGATGCGTGCCGCCCTGGCGGCGGGCATCCTCTGCTTCAACGTCGAGTCGGTCAGCGAACTGCACCGGCTCAGCCGCGTGGCAAGTGACGTTGGCAAGGTCGCCCCGGTCTCGTTCCGGGTCAACCCCGACGTCGACCCGAAGACCCATCCCTACATTTCCACCGGCCTCAAGGAAAACAAGTTCGGCGTGCCGATCGCCGAGGCGCCCGCACTGTACCGGCTCGCCGCCAGCCTGCCCAATCTGGAGATCACCGGCATTGACTGCCACATCGGCTCCCAGCTGACCGAGCTGCTTCCCCTGACCGATGCAGCCGATCGCGTACTGGCGCTGGTCGACACGCTCGCGGCCGAAGGGATGGTCTTGCGCCACATCGATCTCGGCGGCGGCATCGGTATCCGCTACCGCGATGAAATTCCCCCCGACCTCGCCGTCTACGGCCGCGAGCTCGCCAGGCGCTTTGCCGGGCGGCGCGAGACGCTGCTATTGGAGCCGGGGCGCTCGCTGGTCGGCAACGCGGGTCTGCTGCTCACCCGGGTCGAATACCTGAAGCCGGGGACAGACAAGAACTTTGCCATTGTCGATGCCGCGATGAACGACCTGATGCGGCCCGCGCTCTACGAGGCGTATCACGACATCGTCGCCGTCACCCCACGGAACGCACCGGCCCGACGTTACGATATCGTCGGTCCTGTCTGCGAGACCGGCGATTTTCTTGGCTTTGCGCGCGACCTGGCCATCGAGGAAGGAGACTTCCTGGCCCTGCTTTCAGCGGGTGCCTATGGGATGAGCATGGCATCGAACTACAATTCCCGCCCGCGCGCGGCAGAAATCCTGATCGACAAGAAAGAAATCCACATTATTCGAGATCGGGAAACGCAAAGTGCCATGATGGCCGGAGAGCGGCTTGTTTGCTGA
PROTEIN sequence
Length: 415
LNTLHRIDGRLHLEDVALDTLAERFGTPLYVYSRQALETAYQDYSRAFASIPHLICYAVKANSSLAILNLFARLGAGFDIVSGGELARVLAAGGDPGKIVFSGVGKTADEMRAALAAGILCFNVESVSELHRLSRVASDVGKVAPVSFRVNPDVDPKTHPYISTGLKENKFGVPIAEAPALYRLAASLPNLEITGIDCHIGSQLTELLPLTDAADRVLALVDTLAAEGMVLRHIDLGGGIGIRYRDEIPPDLAVYGRELARRFAGRRETLLLEPGRSLVGNAGLLLTRVEYLKPGTDKNFAIVDAAMNDLMRPALYEAYHDIVAVTPRNAPARRYDIVGPVCETGDFLGFARDLAIEEGDFLALLSAGAYGMSMASNYNSRPRAAEILIDKKEIHIIRDRETQSAMMAGERLVC*