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SCNpilot_expt_500_bf_scaffold_14620_4

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(2072..2407)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC id=1311316 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 231
  • Evalue 5.00e-58
tyrosine recombinase XerC; K03733 integrase/recombinase XerC similarity KEGG
DB: KEGG
  • Identity: 75.0
  • Coverage: 96.0
  • Bit_score: 152
  • Evalue 7.00e-35
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 112.0
  • Bit_score: 231
  • Evalue 6.90e-58

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 336
GCACTTCTTGGCGGTAACGATACTCCCGCATTGTTCCTCAGTCGCTGGGGGAGACGCCTTTCGGTGCGCAGCGTACAGATGCGTCTCGATCACTGGGTCTCGCAGTCCGGGTTGGGGCAATCAGTACACCCGCACATGCTCCGCCACGCTTTTGCCAGTCATATGCTTCAATCGTCAGGTGATCTCCGGGCGGTCCAGGAGATGCTTGGCCACGCCAACATCACCACCACCCAGATCTATACTCACTTGGACTGGCAACACTTGGCGAAGGTATATGACTCGGCTCATCCCCGGGCCAGACGCGCGAAACCAGTGAGCGGCACCGAGAACACATAG
PROTEIN sequence
Length: 112
ALLGGNDTPALFLSRWGRRLSVRSVQMRLDHWVSQSGLGQSVHPHMLRHAFASHMLQSSGDLRAVQEMLGHANITTTQIYTHLDWQHLAKVYDSAHPRARRAKPVSGTENT*