ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

SCNpilot_expt_500_bf_scaffold_32905_1

Organism: SCNPILOT_EXPT_300_BF_Thiobacillus_SCN1_62_76

near complete RP 52 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 2..112

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway protease TraF-like protein id=1311304 bin=GWE1_T_denit_62_9 species=endosymbiont of Riftia pachyptila genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 80
  • Evalue 3.60e-13
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 80
  • Evalue 5.00e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 111
AACCATTTCTATGTTTACGCACCCCACAAGGATTCGTTGGATTCGCGCTTTGCGCTGACGGGCTGGATTCCGCTTGAGCGTGTCTCCGGGCGCGCGATCCCGCTGTTTTGA
PROTEIN sequence
Length: 37
NHFYVYAPHKDSLDSRFALTGWIPLERVSGRAIPLF*