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SCNpilot_expt_500_bf_scaffold_2251_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(4504..5409)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding domain-containing protein, AraC-type n=1 Tax=Acidovorax sp. CF316 RepID=J1EGG8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 277.0
  • Bit_score: 412
  • Evalue 4.20e-112
  • rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJE51354.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.1
  • Coverage: 277.0
  • Bit_score: 412
  • Evalue 5.90e-112
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 276.0
  • Bit_score: 406
  • Evalue 9.50e-111
  • rbh

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGCTACCCTCGACCGCTTGTCGTCACTGATGGAGCGCTTCCACGTGCGGGCGCACCTGTTTCATGCCGGGGCGCTGTGCGGGTTGGCGCAATTCGACGCCCGGCCGGGGCGGGGTTTCCTGCACGTGTTGCGACGGGGCGAACTGGTGGTGACGCATCGCCCGCGCAGCGGTGTGCCGCGCCGCATCGAGGTTGCCGAACCGAGCCTGTTGTTCTACCCGCGCCCGCTGGCGCACAGCTTCCACAACCCGCCGGCCGAGGGTTCGGATTTCGTCTGCGCCACGCTTGATTTCGATGGCGGCGCGCGGCATCCGCTGGCGCGCGCCCTGCCGCCGCTGCTGGTGCTGCCACTGCGGGCGGTGGACGGCCTGGAGCAGACGCTGGCGCTGCTGTTCGCGGAAGCCGAGCGGGTACGCTGCGGCCAGCGCCTGCTGGCCGACCGCCTGTTCGACGTGCTGGTGCTGCAACTGCTGCGCTGGCTGCTCGACCATCCCGCAGAGGCGAAACTGCCGCCGGGCATGCTGACCGGCCTGTCGGACCCGAAGCTGGCGCGCACACTGACCGCGATCCACGAGCAGCCCGGCGCAGACTGGTCGCTGGCCGCCATGGCCGAGACCGCCGGCATGTCGCGCAGTGCATTTGCCGCCGCCTTCAAGCAGCACGTCGGCCACACGCCGGTCGAGTACCTCACGCAATGGCGCGTTGCCGTCGCGCAGGCCCTGCTTCGCCAAGGCGCTTCGCTGAAAACGGCGAGCCTGCAGCTCGGCTATCGCAACGCGTCGTCACTGTCGCGGGTTTTCACCCAGTCTGTGGGCATGTCGCCGCGCGCGTGGTTGCGGAATGGGGGAGCTGAAAAAGGCAATGAGCCACGTCTCCCTCAACCCGGTGCCGGGGGTGGACGGTGA
PROTEIN sequence
Length: 302
MATLDRLSSLMERFHVRAHLFHAGALCGLAQFDARPGRGFLHVLRRGELVVTHRPRSGVPRRIEVAEPSLLFYPRPLAHSFHNPPAEGSDFVCATLDFDGGARHPLARALPPLLVLPLRAVDGLEQTLALLFAEAERVRCGQRLLADRLFDVLVLQLLRWLLDHPAEAKLPPGMLTGLSDPKLARTLTAIHEQPGADWSLAAMAETAGMSRSAFAAAFKQHVGHTPVEYLTQWRVAVAQALLRQGASLKTASLQLGYRNASSLSRVFTQSVGMSPRAWLRNGGAEKGNEPRLPQPGAGGGR*