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SCNpilot_expt_500_bf_scaffold_2312_22

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 25343..25720

Top 3 Functional Annotations

Value Algorithm Source
GreA/GreB family elongation factor n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WHZ5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 85.6
  • Coverage: 111.0
  • Bit_score: 186
  • Evalue 2.10e-44
GreA/GreB family elongation factor {ECO:0000313|EMBL:EIL99086.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 111.0
  • Bit_score: 186
  • Evalue 2.90e-44
transcription elongation factor similarity KEGG
DB: KEGG
  • Identity: 85.6
  • Coverage: 111.0
  • Bit_score: 185
  • Evalue 1.10e-44

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGAGTCATTCAGCAATCACCGTGTCGCGCATCGACCTGGATCGCATCGAAGCCCTGCTGGAGCGGTTGCCGGCAGCCGAGGCCGACAAGCTGCAGGCGCTGCGCGCCGAGCTGGATCGCGCCGACGTGGTCGAGCCGGCGGACATGCCGCCGCACATCGTGACGATGAACTCCACCGTGGTCTTCGAAGATGAGTCCGACGGCGAAAAGCTGACCCTCACCCTGGTCTACCCGGCCGGCGCCGGTGCGCCCGGTACGGTCTCGATCCTCGCCCCCGTGGGCAGTGCGCTGCTGGGCCTGGCGCGCGGCCAGCAGATCGACTGGCCGATGCCCGCGCTGAGCGCCGCGCGCGCGGCGGGCGCACCGGCGGGTCGCTAA
PROTEIN sequence
Length: 126
MSHSAITVSRIDLDRIEALLERLPAAEADKLQALRAELDRADVVEPADMPPHIVTMNSTVVFEDESDGEKLTLTLVYPAGAGAPGTVSILAPVGSALLGLARGQQIDWPMPALSAARAAGAPAGR*