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SCNpilot_expt_500_bf_scaffold_2509_21

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(15705..16928)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VSL2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.1
  • Coverage: 422.0
  • Bit_score: 775
  • Evalue 2.60e-221
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 422.0
  • Bit_score: 775
  • Evalue 3.60e-221
SSU ribosomal protein S1P similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 422.0
  • Bit_score: 768
  • Evalue 1.30e-219

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1224
CTGGTCGACGTGCGCCCGGTGCGCGAGCCGACCTACCTCGAGGGCAAGGAACTCGAGTTCAAGATCATCAAGCTGGATCGCAAGCGCAACAACGTGGTGGTCAGCCGCCGCGCCGTCGTCGAGACCGAGTTCTCCGAGGAGCGCGAGAAGCTGCTGGAACGCCTGGTGGAAGGCGCCGTCGTCAAGGGCGTGGTGAAGAACCTCACCGATTACGGCGCGTTCGTGGACCTGGGCGGCATCGACGGCCTGCTGCACATCACCGACATGGCGTGGAAGCGCGTGCGCCATCCGTCCGAGGTGGTCAACGTCGGCGACGAGCTCGACGTGCGCGTGCTGAAGTACGACAAGGAGCGCAACCGCGTGTCGCTGGGCCTGAAGCAGCTGGGCGACGACCCGTGGGTGAACATCTCGCGTCGCTATCCGGTCGGCAGCCGCATCTTCGGCAAGGTCTCCAAAGGCCTGGTGCACGTGTCCGAGATGGACTGGACCAACAAGAACGTCAACCCGGCCAAGGTGGTGCAGGTCGGCGACGAGACCGAAGTGACCGTGCTGGACGTGGATGAAGAGCGTCGCCGCATTTCGCTGGGTATCAAGCAGACCCGCTCGAACCCGTGGGAAGCCTTCGCCGCCATGCACAAGAAGGGCGACAAGGTGTCGGGCCAGATCAAGTCGATCACCGATTTCGGCGTGTTCATCGGCCTGGAAGGCGGCATCGACGGCCTGGTGCACCTGTCCGACATCTCGTGGCAGGTGTCCGGCGAAGACCTCGTGCGCGACTTCAAGAAGGGCGAGGAGATCGAGGCGGTGGTGCTGGCCGTCGACCCGGAGCGCGAGCGCATCAGCCTCGGGATCAAGCAGATGGAGCAGGATCCGTTCGGCCAGTTCATGGCGGCCAACCCGCGTGGCACGATCGTCAACGGCACGGTCAAGGAAGTCGACGCCAAGGGTGCCGTGATCGACCTGGGCGAGGGCGTGGAGGGTTACCTGCGCGCCAACGACATAGCCAAGGAGCGCATCGACGACGCTACCCAGCACCTGAAGGTGGGCGACAAGGTCGAGGCCAAGTTCACCGGCATGGATCGCAAGGGTCGCCAGCTGGCGCTCTCGATTCGCGCCAAGGACGAGGAAGACGCCCCCGAAGCCGCGGTCGACTACTCTTCGGCCGCCAGTGGCACGACCAAGCTCGGCGCGTTGTTGAAGGAACAGTTCAACAAGGCCGACTGA
PROTEIN sequence
Length: 408
LVDVRPVREPTYLEGKELEFKIIKLDRKRNNVVVSRRAVVETEFSEEREKLLERLVEGAVVKGVVKNLTDYGAFVDLGGIDGLLHITDMAWKRVRHPSEVVNVGDELDVRVLKYDKERNRVSLGLKQLGDDPWVNISRRYPVGSRIFGKVSKGLVHVSEMDWTNKNVNPAKVVQVGDETEVTVLDVDEERRRISLGIKQTRSNPWEAFAAMHKKGDKVSGQIKSITDFGVFIGLEGGIDGLVHLSDISWQVSGEDLVRDFKKGEEIEAVVLAVDPERERISLGIKQMEQDPFGQFMAANPRGTIVNGTVKEVDAKGAVIDLGEGVEGYLRANDIAKERIDDATQHLKVGDKVEAKFTGMDRKGRQLALSIRAKDEEDAPEAAVDYSSAASGTTKLGALLKEQFNKAD*