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SCNpilot_expt_500_bf_scaffold_2144_27

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(24992..25222)

Top 3 Functional Annotations

Value Algorithm Source
XRE family transcriptional regulator n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VQ64_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 64.0
  • Bit_score: 108
  • Evalue 2.50e-21
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 63.0
  • Bit_score: 104
  • Evalue 1.50e-20
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 65.0
  • Bit_score: 112
  • Evalue 3.20e-22

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 231
ATGAACAACTGCCTGCGCGAGTTGCGCGGCGAACAGGCATGGTCGCAGGCCGAGCTGGCCGAGCGCCTGGCCGTGTCGCGGCAAACGGTGAACGCGATCGAGACCGGCAAGTACGATCCCGGCCTGCCGCTGGCGTTCCGGATTGCGCGCCTGTTCGGGCGGCCGATCGAGTCGATCTTCCTGCCTGGCGTGGATGTCGCCGGGCAGGGTCGGGGGCGCCGGCCGACCTAG
PROTEIN sequence
Length: 77
MNNCLRELRGEQAWSQAELAERLAVSRQTVNAIETGKYDPGLPLAFRIARLFGRPIESIFLPGVDVAGQGRGRRPT*