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SCNpilot_expt_500_bf_scaffold_2480_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(9416..9724)

Top 3 Functional Annotations

Value Algorithm Source
YD repeat n=1 Tax=Reinekea blandensis MED297 RepID=A4B8X0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 100.0
  • Bit_score: 88
  • Evalue 4.80e-15
YD repeat {ECO:0000313|EMBL:EAR11071.1}; TaxID=314283 species="Bacteria; Proteobacteria; Gammaproteobacteria; Reinekea.;" source="Reinekea blandensis MED297.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 100.0
  • Bit_score: 88
  • Evalue 6.70e-15
RhsD protein similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 94.0
  • Bit_score: 83
  • Evalue 3.70e-14

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Taxonomy

Reinekea blandensis → Reinekea → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GGCTTCCGGGACTACGACCCGACGCTGGGGCGGTATGTGGAGAGTGATCCCATCGGGTTGGGTGGGGGGATCAATACGTATGCTTATGTGGGAAACAACCCGATCGGAAATACTGACCCGCTGGGATTGTGTTCAGAGGAGCACAAGTACGAGTTCAGTATCTATACGCCATGCACAGCTGCGGAAGCCTTTGGCAAGCTTGGATCCCCTCTTATGAGTGCACCGGGCGCACCTGGCGCGATGCCAGGATTGACGCCGTCAATTACCCTGTGGGGCGGTGGATGGAGCAACAAATATCACAGTATGTGA
PROTEIN sequence
Length: 103
GFRDYDPTLGRYVESDPIGLGGGINTYAYVGNNPIGNTDPLGLCSEEHKYEFSIYTPCTAAEAFGKLGSPLMSAPGAPGAMPGLTPSITLWGGGWSNKYHSM*