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SCNpilot_expt_500_bf_scaffold_3030_30

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 27681..28586

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Rhodanobacter denitrificans RepID=I4WYC2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 301.0
  • Bit_score: 566
  • Evalue 2.30e-158
  • rbh
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 301.0
  • Bit_score: 561
  • Evalue 1.80e-157
  • rbh
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGG89686.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 301.0
  • Bit_score: 561
  • Evalue 7.90e-157

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGGATTCGCAAACCGCCCTGTTCCAGCAACACCGCCAGCGCCTGTTCGGCCTGGCCTACCGCATGCTCGGCACGCCCGCCGACGCCGAGGACGTGCTGCACGATGCCTGGCTGCGCTGGCACGCACAGAATGTCGCCGCGCTGGACGACCCGGAAGCCTGGCTGGTCACCGTGACCACGCGCATCGCGCTGGATCGCCTGCGCCGGGCCAAGACCGAACGCGCGCACTACTCCGGCCCCTGGCTGCCGGAGCCGCTGACCGTGGATACCGACCAGCCCGAGGCGCAACTGGAGCGCGCCGAGAGCCTCACCCTCACCTTTCTGCTGTTGCTGGAGCGGCTGAGCCCCGAGGAGCGCGCCGCCTTCCTGCTGCGCGAAGTGTTCGACTACAGCCACGCCGAAACGGCCTCGATGCTGGAAATCAGCGAAGACGCCTGCCGCCAGCGCGTGCACCGGGCGAAGCAGCGGCTGCGCGAGGATCGACCGCGCCAGACGATGCCGAACGCCGACATCCAGCGGCGCCTGCTCGAACGCTTCATGCAGGCGCTGCAGCAGCCGGACATGCCCACGTTGCGTGCCTTGTTTGCCGAAGACGCCATGAGCGTATCCGACGGCGGCGGCCTGGCGCGGGCCACCCTGCACCCGCTGCACGGCGCCGAGCGGCTGGCCCGGCTGTACATGCAGATCGCGCTGCAGCAGCAGCGCCATGGTGGCGTGCGCCACGAAATCCGTCAGCTCAACGGTACGCCGGCCCTGTTCGGCTGGCAGGGCGACACGCTGGTCTCGGCCAGCTGGATCGACGACGACGGCGAACGCATCACCGCGGTGCATGCCCTGCGCCACCCCGGCAAGCTTGCCCGGCTGGCGGCGGTCACGAAATCGACGGCGCCCACGTCCTTGCACTGA
PROTEIN sequence
Length: 302
MDSQTALFQQHRQRLFGLAYRMLGTPADAEDVLHDAWLRWHAQNVAALDDPEAWLVTVTTRIALDRLRRAKTERAHYSGPWLPEPLTVDTDQPEAQLERAESLTLTFLLLLERLSPEERAAFLLREVFDYSHAETASMLEISEDACRQRVHRAKQRLREDRPRQTMPNADIQRRLLERFMQALQQPDMPTLRALFAEDAMSVSDGGGLARATLHPLHGAERLARLYMQIALQQQRHGGVRHEIRQLNGTPALFGWQGDTLVSASWIDDDGERITAVHALRHPGKLARLAAVTKSTAPTSLH*