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SCNpilot_expt_500_bf_scaffold_3030_32

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(29249..29656)

Top 3 Functional Annotations

Value Algorithm Source
Isocitrate dehydrogenase {ECO:0000313|EMBL:EIL96405.1}; EC=1.1.1.41 {ECO:0000313|EMBL:EIL96405.1};; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 135.0
  • Bit_score: 260
  • Evalue 1.30e-66
Isocitrate dehydrogenase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WAB4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.3
  • Coverage: 135.0
  • Bit_score: 260
  • Evalue 9.30e-67
isocitrate/isopropylmalate dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 135.0
  • Bit_score: 258
  • Evalue 1.10e-66

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 408
ATGATCGTGGACAACACCTGCATGCAGCTGGTGATGAACCCGTACCAGTTCGACGTGATCGTCACCACCAACCTGTTCGGCGACATCCTCTCGGACCTGTGTGCCGGCCTGGTCGGTGGCCTCGGCCTGGCGCCGGGCGACAACATCGGCGAGCACGCGGCGATCTTCGAGGCGGTGCACGGCTCGGCACCGGACATCGCGGGCAAGGGCATCGCCAACCCCTGCGCGCTGCTGCTGGCCGCGGCCGACATGCTCGACTACCTGGACATGGTGGCCAAGGGCGACAAGCTGCGCGCCGCGATCCGCGACACCATGACGAACGATCGCGACAGCGTGACGCCGGACATCGGCGGCAAGGGCAGCACCGGCAGCTTCGCCGACGCCATCGTGAAGCGCCTCGCGGCCTGA
PROTEIN sequence
Length: 136
MIVDNTCMQLVMNPYQFDVIVTTNLFGDILSDLCAGLVGGLGLAPGDNIGEHAAIFEAVHGSAPDIAGKGIANPCALLLAAADMLDYLDMVAKGDKLRAAIRDTMTNDRDSVTPDIGGKGSTGSFADAIVKRLAA*