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SCNpilot_expt_500_bf_scaffold_3117_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(1498..2229)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ11_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 243.0
  • Bit_score: 445
  • Evalue 2.80e-122
  • rbh
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 243.0
  • Bit_score: 445
  • Evalue 8.80e-123
  • rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 244.0
  • Bit_score: 446
  • Evalue 3.00e-122

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGACGACTCATGACGAGCAAGCGGGCCTGATCCTGCTGGTTGAAGACAACCGCCAGATCGCCGAGATGGTGGGCGAGTTCCTTGAAATGCGGGGTTATTCCGTCGATTACGCGGCCGACGGCGTGAGCGGGTTGCACTTGGCCGTATCCAACAGTTACGACGTGATCGTGCTGGACCTGATGCTGCCCGGGCTGGACGGCCTGGAGCTGTGCCGCAAACTGCGCAAGGAGGCGAAGAAGTCCACGCCCGTGCTGATGCTCACCGCGCGCGACACGCTGGAAGACAAGCTGGTCGGCCTGGAGGCCGGCGCCGACGACTACCTGGTCAAGCCGTTCGAAGTGCGCGAACTGGTGGCGCGGCTGCGCGCGCTGATTCGCCGCGACCGCCGCCAGGTATCCACCGAAGTGCTTACCGTGGGCGACATGACGCTGGACACCGCCACGCTGCGGCTGACCCGCGAGGGCCAGGATCTGGTGGTGTCGCCGATCGGCCTGAAACTGCTCGCGATCCTGATGCGCGAATCGCCACGCGTGGTCAGCCGGCGCGACATCGAGCGCGAGATCTGGGGCGACACGCTGCCCGATTCGGACACGCTGCGCTCGCACCTGTACAACTTGCGCCGCGTCATCGACAAACCCTTCGCACGACCTTTGCTACATACCATCCATTCCGCTGGCTACCGGCTGGCCGACCTGGAATCGGAAATGGCGTCGGCGCAGCAACCTGCGTGA
PROTEIN sequence
Length: 244
MTTHDEQAGLILLVEDNRQIAEMVGEFLEMRGYSVDYAADGVSGLHLAVSNSYDVIVLDLMLPGLDGLELCRKLRKEAKKSTPVLMLTARDTLEDKLVGLEAGADDYLVKPFEVRELVARLRALIRRDRRQVSTEVLTVGDMTLDTATLRLTREGQDLVVSPIGLKLLAILMRESPRVVSRRDIEREIWGDTLPDSDTLRSHLYNLRRVIDKPFARPLLHTIHSAGYRLADLESEMASAQQPA*