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SCNpilot_expt_500_bf_scaffold_3117_16

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(11750..12511)

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system protein N (GspN) n=1 Tax=Rhodanobacter denitrificans RepID=I4WZ22_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 247.0
  • Bit_score: 315
  • Evalue 4.50e-83
type II secretion system protein N (GspN) similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 247.0
  • Bit_score: 312
  • Evalue 1.60e-82
Type II secretion system protein N (GspN) {ECO:0000313|EMBL:AGG88033.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 247.0
  • Bit_score: 312
  • Evalue 7.00e-82

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 762
GTGCTCGCGGCAGTCGTGCTGGTGCTGGCGTGGTTTCTGCCGGCGCGCTGGGTGATGCCGTGGGTCGAGCCGCAGTTGCACGGGCTGCGGCTGCAGCAGGTGCAAGGCACGGTTTGGAACGGTGCTGCCGGTAACGTCTTGGATGCCGATGGGCGACGGTTGGGACAGGTGCGCTGGCAGTTGTCGCGCCGCGCGCTGCTCGGCCGGCTGCAGATGCAGCTGGCCTTCGACGGACCGCAGGCGGATTTCTCCGGAACCGTGCGGCGCACGGCGCAGGGTCGCGTCGAGGGCGAAGGCTGGCGGCTGCATGCCGATCTCGCCGCGACGGATGTTCCGCTTCCGGTCGACTGGGGCGCGCCGCTGGGCGAGCTGCAACTGACGGTCGATCATGTACTGCTGCAAGGCGGCTGGCCGCTGCAGTTGCAGGCGCAGGGCCGGTGGCAGCGGGCCGCCGTGCACACGACCGAAGGCGAGCTGGCGCTGGGTGAATTGCAGGGAAGCGCGCAGGCGCAGGGCGGCGTGATCCACGCGCAATGGCACGATCAGGGCGACGGGCCGCTGCAGGTGCGCGGCGAATTGCAGCTGAGCCCGCTGGGCTGGCGTCTGGACAGCACGCTGCGCGCCCGCCATGGCGATCCGGCGTTGCAGCGCTGGCTGGCCCGGCTCGGGCCGGTCGCGCCGGACGGCAGCGTGCACATCCGGCAGGCCGGTGGCCTGGCCGCCAACCCTCCATCGAACCGCCAGGACGCCACGCTGCCATGA
PROTEIN sequence
Length: 254
VLAAVVLVLAWFLPARWVMPWVEPQLHGLRLQQVQGTVWNGAAGNVLDADGRRLGQVRWQLSRRALLGRLQMQLAFDGPQADFSGTVRRTAQGRVEGEGWRLHADLAATDVPLPVDWGAPLGELQLTVDHVLLQGGWPLQLQAQGRWQRAAVHTTEGELALGELQGSAQAQGGVIHAQWHDQGDGPLQVRGELQLSPLGWRLDSTLRARHGDPALQRWLARLGPVAPDGSVHIRQAGGLAANPPSNRQDATLP*