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SCNpilot_expt_500_bf_scaffold_3588_9

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(8471..9850)

Top 3 Functional Annotations

Value Algorithm Source
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148) similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 457.0
  • Bit_score: 754
  • Evalue 1.70e-215
  • rbh
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.7
  • Coverage: 457.0
  • Bit_score: 754
  • Evalue 7.40e-215
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Rhodanobacter denitrificans RepID=M4NEX4_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.7
  • Coverage: 457.0
  • Bit_score: 754
  • Evalue 5.30e-215
  • rbh

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1380
ATGAACGTCCACATCGACCGTGCCCAGCCGGGCCATGTCGCCGCCCTGTGTGCGATCGAACGCAAGGCCGTGCAGCTGTTTCGCGGCCATCCGGCGTGGCCGGCGTACGCGGCGGTGTCGATGCCGGTCGAACTGCTGCGGCAGGCTGTCGAGCGCGGCCTGGTCTGGGTGGCGCCGGATGAAGCGGGCGATCCGCTCGGCTTCATCTGGCTGGACGAGGAGCCGGGCGACGGTGCGATCGGCGTCGCCGAGATCGACGTGCTGCCCGGGCATGGTCGCCGCGGCATCGGCGCGGCCCTGCTCGAACACGCCTGCAACTGGGCGCGCGAGGCGGGCTATCGGCGGGTGGATCTGGGCACCCTTGCCGACGTGCCGTGGAACGCGCCGTTCTACGCACGGCATGGTTTCGCGGTGGTCGACAAGAACGCCCCGGCGTTCGCCAACGCCCGCCAACGCGATCGCGAGCACGGTTTTCCCGACGACCTGCGCGTCTTCATGAGCCGCCCGCTGGCCACGCCGGCGCGCGGTGAATGGACCGCATGGCCCGCGCCGGCCAAGCTGAACCTGTTCCTGCGCATCACCGGTCGCCGTGCCGACGGCTACCACGAACTGCAGACCGTGTTCCGCCTGCTGGACTGGGGTGACGAAGTGCGCCTGCGGGTGCGCGACGATGGCGAAGTGAAGCGCCTGCACGGCGCGCGGGGGGTGGCCGAGTCGGACGACCTGGTCGTGCGCGCGGCCTGCTTGCTGCAGCAGCATGCCGGTTGTGCGCTGGGCGCGGATCTCGCCGTCGACAAGCGCATCCCGATGGGCGGCGGCCTCGGCGGCGGCAGTTCCGACGCGGCCACCGTGCTGGTGGCGCTCAACCACCTGTGGCGGCTGGATCTGGACGAGGACAGCCTGGCCGCGCTGGGCGGCCAGCTCGGTGCCGACGTGCCGGTATTCGTGCGCGGGCGTTCGGCCTGGGCCGAGGGCGTCGGCGAGCGGCTCAGTCCGATCCATCTGCCGCGAAGGCATTACGTGGTGCTCGACCCGCGCGAGCAGGTGCCTACTGCAGCGCTCTTTCAAGCGCCTGAATTGACACGAAATGCGCCGCGGGCGACAATTTCGTCCTTTGTTTCCGGCGCAACGGTCGAGAACGCCTTCGAGCCGGTCGTGCGGGCGCGTTACCCGCGGGTCGCGGCAGCGCTGGCGTGGCTGGGCGGTTTCGGCACGGCGAGGCTTTCGGGTACCGGCGGCTGCGTGTTCCTGGAGCTGCGCTCGCTCGCGCGTGCCCACGCCATCGCAGAACGTTGTCCGGCGACATTCAAGGTACACGTGGCGAGCGGGATGGATGTCTCGCCGCTGCATCAGGCGCTGGCGCGGCAACGCACAAGTTGA
PROTEIN sequence
Length: 460
MNVHIDRAQPGHVAALCAIERKAVQLFRGHPAWPAYAAVSMPVELLRQAVERGLVWVAPDEAGDPLGFIWLDEEPGDGAIGVAEIDVLPGHGRRGIGAALLEHACNWAREAGYRRVDLGTLADVPWNAPFYARHGFAVVDKNAPAFANARQRDREHGFPDDLRVFMSRPLATPARGEWTAWPAPAKLNLFLRITGRRADGYHELQTVFRLLDWGDEVRLRVRDDGEVKRLHGARGVAESDDLVVRAACLLQQHAGCALGADLAVDKRIPMGGGLGGGSSDAATVLVALNHLWRLDLDEDSLAALGGQLGADVPVFVRGRSAWAEGVGERLSPIHLPRRHYVVLDPREQVPTAALFQAPELTRNAPRATISSFVSGATVENAFEPVVRARYPRVAAALAWLGGFGTARLSGTGGCVFLELRSLARAHAIAERCPATFKVHVASGMDVSPLHQALARQRTS*