ggKbase home page

SCNpilot_expt_500_bf_scaffold_3642_14

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(14465..15025)

Top 3 Functional Annotations

Value Algorithm Source
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hydrolase {ECO:0000256|HAMAP-Rule:MF_00298}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 186.0
  • Bit_score: 356
  • Evalue 2.40e-95
RNA pyrophosphohydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFL2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.2
  • Coverage: 186.0
  • Bit_score: 356
  • Evalue 1.70e-95
  • rbh
NTP pyrophosphohydrolase similarity KEGG
DB: KEGG
  • Identity: 87.1
  • Coverage: 186.0
  • Bit_score: 354
  • Evalue 2.00e-95
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGATTGATGTAGATGGCTACCGTCCGAACGTGGGGATCGTGCTGCTCAATGCAGACGGCCAGCTGTTCTGGGCGCGCCGGGTCAATCGTGACGGCTGGCAGTTCCCGCAGGGCGGCATGCGCACCGACGAAACCCCGCTGGAGGCGATGTACCGCGAGCTGGAGGAGGAAACCGGCCTGGCGGCACACCACGTGGAAGTGATCAGCGCCACCCACGGCTGGCTGCGTTATCGCCTGCCCGAGCGCTACGTGCGCCGGCACCAGCGCCCGACCTGCATCGGCCAGAAGCAGGTGTGGTTCCTGCTGAAGCTGGTCGGCGGCGAGGAGGCGCTGAAGCTCGATGCCAACGAGAAGCCGGAGTTCGACATCTGGCGCTGGGTCGACTTCTGGTACCCGGCCGCGCACGTGGTGAATTTCAAGCGCGACGTGTACGCGCGGGCACTGCGCCACTTCGCGCCGCTGGTGGAGGATTTGTTCGGCATGGAGATCGGCACCACGCCGCCACGCGAAGACGCCGACACACCCGTCGGGGGCCCGCGCACCGGACGCGCGGCAGCCTGA
PROTEIN sequence
Length: 187
MIDVDGYRPNVGIVLLNADGQLFWARRVNRDGWQFPQGGMRTDETPLEAMYRELEEETGLAAHHVEVISATHGWLRYRLPERYVRRHQRPTCIGQKQVWFLLKLVGGEEALKLDANEKPEFDIWRWVDFWYPAAHVVNFKRDVYARALRHFAPLVEDLFGMEIGTTPPREDADTPVGGPRTGRAAA*