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SCNpilot_expt_500_bf_scaffold_4078_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(2937..4637)

Top 3 Functional Annotations

Value Algorithm Source
Penicillin-binding protein, beta-lactamase class C n=1 Tax=Rhodanobacter denitrificans RepID=M4ND04_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 557.0
  • Bit_score: 910
  • Evalue 9.30e-262
  • rbh
penicillin-binding protein, beta-lactamase class C similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 557.0
  • Bit_score: 910
  • Evalue 2.90e-262
  • rbh
Penicillin-binding protein, beta-lactamase class C {ECO:0000313|EMBL:AGG88549.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 557.0
  • Bit_score: 910
  • Evalue 1.30e-261

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1701
ATGGTCCAGCGATTCGGGTCCGTGCGTGCGCTGTCGTTCCGGCTGTTGGCCGGCCATGCCTTGCTGGTGCTCGGCGCGTCGGCGCTGGCGCAGGCTCCGGCCACGCAGCAGCTGCCGCCGCCGGTATCGACCGGCGACATCGTGCAGCCGCTGCTGCCGGCGCAGCTGCAGGATTTCGACGCCTACATGGCGGATACGCTGAAGACCTTCGAGGTGCCCGGCATCGCGGTGGCCATCGTCAAGAACGGCAAGGTGGTGATGGAGCGCGGCTTCGGCGTGAAGGAGCTGGGCAAGCCGGACCCGGTCGACGCCCACACGCTGTTCGCGATCGCCTCCAACACCAAGGCCTTCACTGCCGCGGCGCTGCAGCAGCTGGCCGACGCGGGCAAGCTGGACATGGACGACCGCGTGATCGACCACCTGCCCTGGTTCCGCATGTCCGATCCGTACGTGACGCACGAGATGCGCATTCGCGACCTGCTGGCGCACCGCAGTGGCCTGAGTCTGGGCGCGGGTGATCTGCTGTACTGGCCGCCGTCCTCGTACACCACCAGGGAAGTGGTCGAGCGGTTGGCCAAGGTGCCGCTGAAGAACGGTTTCCGCAGCCACTACGCCTACGACAACATCCTGTTCGCGGTGGCCACCCTGGTGATCGAACAGGCTTCCGGCCAGAGCTATGCCGACTACGTGCGCGAGCACCTGTTCAAGCCGGTGGGCATGGAGGAGTCGCTGATCGACATGACTTACCTGAAGCCCGGCATGGACGTGGCTGCCGGTCATGCCCCGTACGAGTTCAAGGACATCAAGCCGGTGCCGCCGATGGCCTGGCTCAATGATCCGGGCGCTGGCGGCATCTACTCCAGCGTGCATGACCTGGCCAAGTGGATGAACGTGCAACTGGCCGGCGGCGCCTTGCCGACCGTGGGCGCCGACGGCAAGCCGCGGCGGGTGTTCTCCGAGAAGAGCCACCACGAGATGTGGTCGATGCTGACGCCGATACCGATCAGGAAGGCGTCGATCCCCGAGCTGGAGCCGCTGACACCGGACTACTACGGCTATGGCGAAGGCTGGTTCCTCGGCCAATACCAGGGCCGCAAGCTGGTCTGGCATACCGGCGGCTGGCCCGGTTTCGTCTCGCGCGTGACGATGGTGCCCTCGTTGAAGCTCGGCGTGGTAGTGCTGACCAACCAGCAGTCCGGCGCCGCGTTCAACGCGGTGACGTACCGAGTGCTGGATGCGTACCTCAACCCGTCGCACAAGACCGACTGGGTGGCGGTGTACGAGAAGGCCGTGCAGCACGCCCAGGCCAAGGCCGACGACAGCGTGGCGAAGCACGAGCAGGCGCGCGACAAGCGCAGCAAACCCTCGCTGCCGCTGGCCGACTACGCCGGCACGTATCGCGACTCGTGGTACGGCGACGTCATCATCAGCCAGGAGCGCGGCAAGCTGCGCATGCGCTTTGGCAAGACCGAGCAGCTGGTCGGCACGCTGACGCCGTGGCAACACGACAGCTTCACCGTGCGCTGGGATGACCGCTCGCTGGACGCCGATGCCTTCGTCGATTTCGCGCTGGACATGGACGGCAAGATCCGCGAGGTGCGCATGCAGCCGATCTCGCCGTTGACCGATTTCAGCTTCGATTTCCAGGACCTGCGACTGGTGCCGGTGGAGGCCGCCACCGGGGCGTCAGCAGGCAAGTGA
PROTEIN sequence
Length: 567
MVQRFGSVRALSFRLLAGHALLVLGASALAQAPATQQLPPPVSTGDIVQPLLPAQLQDFDAYMADTLKTFEVPGIAVAIVKNGKVVMERGFGVKELGKPDPVDAHTLFAIASNTKAFTAAALQQLADAGKLDMDDRVIDHLPWFRMSDPYVTHEMRIRDLLAHRSGLSLGAGDLLYWPPSSYTTREVVERLAKVPLKNGFRSHYAYDNILFAVATLVIEQASGQSYADYVREHLFKPVGMEESLIDMTYLKPGMDVAAGHAPYEFKDIKPVPPMAWLNDPGAGGIYSSVHDLAKWMNVQLAGGALPTVGADGKPRRVFSEKSHHEMWSMLTPIPIRKASIPELEPLTPDYYGYGEGWFLGQYQGRKLVWHTGGWPGFVSRVTMVPSLKLGVVVLTNQQSGAAFNAVTYRVLDAYLNPSHKTDWVAVYEKAVQHAQAKADDSVAKHEQARDKRSKPSLPLADYAGTYRDSWYGDVIISQERGKLRMRFGKTEQLVGTLTPWQHDSFTVRWDDRSLDADAFVDFALDMDGKIREVRMQPISPLTDFSFDFQDLRLVPVEAATGASAGK*