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SCNpilot_expt_500_bf_scaffold_6017_31

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(34644..35165)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor NusA n=1 Tax=Rhodanobacter denitrificans RepID=I4WLT1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 173.0
  • Bit_score: 309
  • Evalue 1.70e-81
transcription termination factor NusA similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 173.0
  • Bit_score: 309
  • Evalue 5.40e-82
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 173.0
  • Bit_score: 309
  • Evalue 2.40e-81

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 522
GTGCGCCTGGCCAGCAAGCTGACCGGCTGGCAGCTCAACGTGATGACGCAGGACCAGGTCACCGCCAAGAGCGAGGCCGAGCAGGAAGCGGCACGCGTCCTGTTCATGGACAAGCTAGAGGTCGACCAGGAGATCGCAGTCATCCTGGTGCAGGAGGGTTTCTCCAGCATCGAGGAAATCGCCTACGTGCCCAGCGCCGAGCTGCTGGCCGTGGAGGGCTTCGACGAGGACATCGTCGAGGAGCTGCGTGCCCGCGCCCGCGATGCGCTGCTGACCGAGGCGCTGGCGGTGGAGGAGGGCGTCGACGATCACCAGCCCAGCGCCGAGCTGCTTGCCCTGGAAGGCATGGACGAGGAAACCGCTTATGCGCTGGCCGCGCGTGAGGTCTGCACGGTCGACGACCTGGCCGACCTGGCAGTGGACGATCTCATCGATATCGAGGGCATGGATGAGGAGCGCGCTGCGGCGCTGATCATGGCGGCCCGCGCGCCGATGATCGCGCGGCTGGAGCAGGGTGGCTGA
PROTEIN sequence
Length: 174
VRLASKLTGWQLNVMTQDQVTAKSEAEQEAARVLFMDKLEVDQEIAVILVQEGFSSIEEIAYVPSAELLAVEGFDEDIVEELRARARDALLTEALAVEEGVDDHQPSAELLALEGMDEETAYALAAREVCTVDDLADLAVDDLIDIEGMDEERAAALIMAARAPMIARLEQGG*