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SCNpilot_expt_500_bf_scaffold_7022_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3072..3329)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L27 n=1 Tax=Rhodanobacter fulvus Jip2 PF1_9GAMM">RepID=I4VPF1_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 85.0
  • Bit_score: 168
  • Evalue 4.00e-39
ribosomal protein L27 similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 85.0
  • Bit_score: 158
  • Evalue 9.80e-37
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 86.0
  • Bit_score: 169
  • Evalue 2.50e-39

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCACATAAAAAAGGCGTAGGTTCCAGCCGCAACGGTCGCGATTCGAACCCGAAATACCTCGGCGTCAAGGTCTACGGTGGCCAGGCCATCGAAGCCGGCAACATCATCGTGCGCCAGCGCGGCACCCAGTTCCATCCGGGCAATGGCGTCGGCCTGGGTCGCGACCATACGCTGTTCGCGCTGGTCGACGGCAAGGTCCAGTTCGCTGTCCGCGGCGACAAGAACCGCCGTTTCGTCGACGTCGTGCAGGCGTAA
PROTEIN sequence
Length: 86
MAHKKGVGSSRNGRDSNPKYLGVKVYGGQAIEAGNIIVRQRGTQFHPGNGVGLGRDHTLFALVDGKVQFAVRGDKNRRFVDVVQA*