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SCNpilot_expt_500_bf_scaffold_8756_10

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 8917..9369

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 151.0
  • Bit_score: 231
  • Evalue 7.20e-58
Pseudouridine synthase n=1 Tax=Rhodanobacter denitrificans RepID=M4ND80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 151.0
  • Bit_score: 231
  • Evalue 5.10e-58
pseudouridine synthase family protein similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 151.0
  • Bit_score: 231
  • Evalue 1.60e-58

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGTCCCGTCCTTCTTCCTTCCACCCGGCGCGCGCGACCGGGCCGACTCCGCCGTCGCGCTACGGGCTTGCCCGCGTGCTGTCCAAACTGGGTGTGTGCTCGCGCAGTCAGGCCGAGCAGTGGATTCGTGCGGGCCGGGTCAGTGTGGGCGGGCGGGTCGTCCGCGACCCCCAGCATCCGACCCTGATCGACCGCCAGGGGATCGCCATCGACGGCGAAGCCGTGGGCCGGGCCACGCCTGTCCACGTGGCCTTCAACAAGCCGCGCGGCATCGTGGTCAGCGCGGCCGACGAGCATGGTCGCGCGACGGTCTACACCGCGCTGGCGGCCGCCGGGCTGCCCTGGCTGGGTCCGGTCGGCCGGTTGGACAAGGCCAGCGAAGGACTGTTGCTGCTGAGCAACGACACCCGTTGGGCGGCTGCCATCACCGACCCGCTGACGCATCTGGAGAAG
PROTEIN sequence
Length: 151
MSRPSSFHPARATGPTPPSRYGLARVLSKLGVCSRSQAEQWIRAGRVSVGGRVVRDPQHPTLIDRQGIAIDGEAVGRATPVHVAFNKPRGIVVSAADEHGRATVYTALAAAGLPWLGPVGRLDKASEGLLLLSNDTRWAAAITDPLTHLEK