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SCNpilot_expt_500_bf_scaffold_11779_14

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(5540..6322)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L2 n=1 Tax=Rhodanobacter denitrificans RepID=I4WKR6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 120.0
  • Bit_score: 240
  • Evalue 1.90e-60
LSU ribosomal protein L2P similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 120.0
  • Bit_score: 240
  • Evalue 6.00e-61
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 120.0
  • Bit_score: 240
  • Evalue 2.70e-60

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 783
ATGGCACTAATCAACCACAAGCCGACCTCGCCGGGTCGCCGCGACGCAGTCAGCGTCCGCACGGAAGGCCTGTACAAGGGCGCGCCCTACGCTCCTTTGACCGAGGCGCAATCCCGTACCGGCGGCCGCAACCATCATGGCCGGATCACCACGCGTCATCGTGGCGGCGGTCACAAGCAGCATTACCGCATCATCGACTTCAAGCGTGACAAGGAAGGCATCGCCGCCCGCGTCGAGCGCATCGAATACGATCCCAACCGCACCGCGCACATCGCGCTGCTGTGCTACGCCGATGGCGAGCGTCGCTACATCATCGCGCCCAAGGGCGTGCAGGTGGACGATCGCCTGGTGTCTGCGCAACATCCCGATGGGCAGCACGATCCACTGCGTGGAGCTGCGTCCCGGCAAGGGCGCGCAGATCGCCCGCAGCGCCGGCGCCTCGGTGCAGCTGGTTGCCCGCGAGTCCGGTTACGCCACGTTGCGCCTTCGCTCCGGCGAGATGCGTCGCGTCTCGGTCGATTGCCGCGCCACCATCGGCGAAGTCGGCAACGGCGAGCACAGCCTGAAGAAGCTGGGCAAGGCCGGCGCCAAGCGCTGGGTAGGCATTCGCCCGACCGTCCGCGGCGTGGTGATGAACCCGGTCGACCACCCGCACGGTGGCGGCGAAGGCAAGACCTCCGGCGGTCGTCATCCGGTCAGCCCGTGGGGCACGCCGGCCAAGGGCTACAAGACCCGCAACAACAAGCGCACGCAGCACTTCATTGTGCGTCGTCGTATCTTTGA
PROTEIN sequence
Length: 261
MALINHKPTSPGRRDAVSVRTEGLYKGAPYAPLTEAQSRTGGRNHHGRITTRHRGGGHKQHYRIIDFKRDKEGIAARVERIEYDPNRTAHIALLCYADGERRYIIAPKGVQVDDRLVSAQHPDGQHDPLRGAASRQGRADRPQRRRLGAAGCPRVRLRHVAPSLRRDASRLGRLPRHHRRSRQRRAQPEEAGQGRRQALGRHSPDRPRRGDEPGRPPARWRRRQDLRRSSSGQPVGHAGQGLQDPQQQAHAALHCASSYL*