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SCNpilot_expt_500_bf_scaffold_12081_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(1910..3169)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 419.0
  • Bit_score: 769
  • Evalue 3.50e-219
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1) similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 419.0
  • Bit_score: 760
  • Evalue 3.60e-217
  • rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDM5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 419.0
  • Bit_score: 769
  • Evalue 2.50e-219
  • rbh

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAGTGAGATCGTTTCGCAACAACCCCGTCCGGCGGCGCCCGCGCCGCGCCGCGCCAGCGTGGGCGTGCAGGTGGGAAAGGTCAAGGTAGGCGGCGGCGCCCCGATCGTGGTGCAGTCGATGACCAATACCGACACCGAGGACCCGGCCAGCACCGCGAAACAGATCGCCGAGCTGGCCCGCGCCGGCTCCGAGCTGGTGCGCATCACGGTGAACACGCCAGCCGCCGCGGCCGCGGTGCCGCGCATCGCCGAGCGGCTGGCGATGATGGGCGTGGACGTGCCGATCATCGGCGACTTCCACTACAACGGCCACCAGTTGCTGGAGCGCGAACCGGCCTGCGCCGAGGTGCTGGCGAAATACCGCATCAACCCCGGCAACGTCGGTTTCGGCAAGAAGCACGAAAGCCAGTTCGCCTCGATCATCGAGAAGGCGCTGCGCTACGGCAAGCCGGTGCGCATCGGCGCCAACTGGGGTTCGCTGGACCAGTCCATGGTGGCCGCGCTGATGGACGAGAACGCGCGGCGCGCCGAGCCGTGGGATGCCGCGCACGTGGCGCGCGAAGCCTTGATCCGTTCCGCCCTGGATTCGGCCGCGCGTGCCGAGGAGCTCGGCCTGCCGCGCGAGCGCATCATCCTTTCATGCAAGGTTTCCGGCGTGCAGGAGCTGATCGCCGTGTACCGCGACATCGCCGCGCGCGGCGACTACGCGCTGCACCTGGGCCTGACCGAGGCCGGCATGGGTTCCAAGGGCATCACCGCCTCGGCCGCTGCGCTGGCGGTGCTGCTGCAGGAGGGCATCGGCGACACCATCCGCATCTCGCTCACGCCCGAACCCGGTGCCTCGCGCACCGGCGAGGTGATCGTGGCGCAGGAGCTGTTGCAGACGATGGGTCTGCGCTCGTTCACGCCGCTGGTCACCGCCTGCCCGGGTTGCGGGCGCACCACCAGCGAGTTCTTCCAGGAACTGGCCAAGACCGTGCAGGAACACGTGCGCGAGCAGATGCCGCTGTGGCGGGTGAAATACGACGGCGTGGAGAACCTCACCCTGGCGGTGATGGGCTGCATCGTCAACGGGCCGGGCGAATCCAAGCACGCCAACATCGGCATCTCGTTGCCGGGCAACGGCGAGGCGCCGGCCGCGCCGGTGTTCATCGACGGCGAGAAGGCGATGACGCTGCGCGGCGACAACATCGCCAACGAGTTCGTCGACATCCTCGACGACTACGTGGCGCGCAAGTACGCCGCGCGCGCTAGCTGA
PROTEIN sequence
Length: 420
MSEIVSQQPRPAAPAPRRASVGVQVGKVKVGGGAPIVVQSMTNTDTEDPASTAKQIAELARAGSELVRITVNTPAAAAAVPRIAERLAMMGVDVPIIGDFHYNGHQLLEREPACAEVLAKYRINPGNVGFGKKHESQFASIIEKALRYGKPVRIGANWGSLDQSMVAALMDENARRAEPWDAAHVAREALIRSALDSAARAEELGLPRERIILSCKVSGVQELIAVYRDIAARGDYALHLGLTEAGMGSKGITASAAALAVLLQEGIGDTIRISLTPEPGASRTGEVIVAQELLQTMGLRSFTPLVTACPGCGRTTSEFFQELAKTVQEHVREQMPLWRVKYDGVENLTLAVMGCIVNGPGESKHANIGISLPGNGEAPAAPVFIDGEKAMTLRGDNIANEFVDILDDYVARKYAARAS*