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SCNpilot_expt_500_bf_scaffold_12280_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 2948..3232

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B371F3 similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 95.0
  • Bit_score: 137
  • Evalue 6.30e-30
transcriptional regulator; K03717 LysR family transcriptional regulator, transcriptional activator of nhaA similarity KEGG
DB: KEGG
  • Identity: 63.2
  • Coverage: 95.0
  • Bit_score: 124
  • Evalue 1.70e-26
Transcriptional regulator {ECO:0000313|EMBL:BAI74728.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 95.0
  • Bit_score: 124
  • Evalue 7.80e-26

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 285
TTGGCCACGCTGTCGCGCAATTTCCAGATCGGTTTCCTGCGGCCATTGCTGGGACGCCGGAATGTCGAGGTCATCGTTCGCTCGGGCACCACCGCCTTCCTGTTGCAAAGCCTGGAAGCACACCGGCTGGACGTGGCGCTGGTCAATGTCGCGCCCGCCCGCGATGCGGCCACTCCCTGGGTTTCCCACGCCATTGCCGAACAACCCGTCAGCCTGATCGGAACGCCGAAACGCATCGGCAAGGGCGGCACGCTGAAGACACTGCTGACCAGGCAACCCCTCGTG
PROTEIN sequence
Length: 95
LATLSRNFQIGFLRPLLGRRNVEVIVRSGTTAFLLQSLEAHRLDVALVNVAPARDAATPWVSHAIAEQPVSLIGTPKRIGKGGTLKTLLTRQPLV