ggKbase home page

SCNpilot_expt_500_bf_scaffold_13095_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 1955..3184

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VJ53_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 423.0
  • Bit_score: 673
  • Evalue 1.40e-190
  • rbh
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL87244.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 423.0
  • Bit_score: 673
  • Evalue 1.90e-190
RND family efflux transporter, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 83.5
  • Coverage: 423.0
  • Bit_score: 672
  • Evalue 7.40e-191
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1230
ATGATTCGCGACACATCGGCACAGGACAAACTGGTAGAGGTCAAACCCAATCGCAAGCGGCAGCTGATCCTCGCTGCCGTCGGCGTGCTCGTGATCGGCCTGCTGGCCTGGCTGGCGCCGGGGATCGGCCGGCTGTTCTCCGCCTCCGGTTCGGTGAGCGCCTCGCGGCTGTCGTTCGCCACCGTCGAGCGCGGCCCGTTCGTGCGCGACATCGCCGCCGAGGGCAAGGTGGTGGCCGCGGTCAGCCCCACCTTGTACGCGACCTCCGGCGGCGCGGTGACGCTGCAGGTGCACGCCGGCGACACGGTGAAGAAAGGCCAGGTGCTGGCCACCATCGACAGCCCCGAGCTGACCAACAAGCTGGCGCAGGAACAGAGCAACGCCGACGCGATGCAGGTCGACTACCTGCGTGCTCAGGTCGACGCGCGCAAGCAGCGCTCCGCCCTGCAGAAGGCGTACGACAACGCCAAGATCGACCTGCAGACCGCGCAGCGCGATCTCGCCCGCTACCAGAAGGCGTTCGCCCGCGGTGCCGTGCCCAGCATGGACGTCGACCGCGCCAAGGACACCCTGGACAAGGCCAACATCGCCCTGGAACACGCGCGCAGCGACCTGGGCATGGACAACGCCAGTCTCAACTTCGACATCCAGTCCAAGAAGCTGGCGCATGACCGCCAGCTGCTGCTGGTGGCCGACCTCAAGCGCCAGGTCGACGACCTCATCGCCGAAAAGGCCACCGTGGCCAAGGATGCGCAGCTGCTCAGCGTGGTCGACCTGTCCGCACTGCAGGTGGAGATGCAGGTGCCGGAGAGTTTCGCCCGCGACCTCGGCATCGGCATGACCGGCGAGATCAGCGGCAACGGCCACACCTGGAAGGGCATCGTCAGCGCGATCTCGCCCGAAGTGGTCAACGGCCAGGTCGCCGCGCGGCTGCGCTTCGACGGCACCACGCCGAACCAGCTGCGCCAGAACCAGCGCCTGTCGGTGCGCGTGCTGCTGGACAAGCGCGACAACGTGCTCACCGTGCAGCGCGGCTCCTTCGTCGACGAATCCGGCGGCAGCTACGCCTACCTGGTGCACGACGGCATCGCCACGAAAACCCCGATCCGCATCGGCGCCTCCAGCATCGACAAGGTGGAGATCCTCGAAGGCCTGAAGGAAGGCGACAAGATCGTGATCTCCGGCACCGACAGCTTCAAGGGCGCGGCGAAGGTTGCCATCTCGCAATAG
PROTEIN sequence
Length: 410
MIRDTSAQDKLVEVKPNRKRQLILAAVGVLVIGLLAWLAPGIGRLFSASGSVSASRLSFATVERGPFVRDIAAEGKVVAAVSPTLYATSGGAVTLQVHAGDTVKKGQVLATIDSPELTNKLAQEQSNADAMQVDYLRAQVDARKQRSALQKAYDNAKIDLQTAQRDLARYQKAFARGAVPSMDVDRAKDTLDKANIALEHARSDLGMDNASLNFDIQSKKLAHDRQLLLVADLKRQVDDLIAEKATVAKDAQLLSVVDLSALQVEMQVPESFARDLGIGMTGEISGNGHTWKGIVSAISPEVVNGQVAARLRFDGTTPNQLRQNQRLSVRVLLDKRDNVLTVQRGSFVDESGGSYAYLVHDGIATKTPIRIGASSIDKVEILEGLKEGDKIVISGTDSFKGAAKVAISQ*