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SCNpilot_expt_500_bf_scaffold_12750_10

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 5469..5708

Top 3 Functional Annotations

Value Algorithm Source
exodeoxyribonuclease IX n=1 Tax=Dyella ginsengisoli RepID=UPI00036B13E2 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 78.0
  • Bit_score: 136
  • Evalue 1.20e-29
5'-3' exonuclease {ECO:0000313|EMBL:EIL91034.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 80.0
  • Bit_score: 135
  • Evalue 2.80e-29
5'-3' exonuclease (including N-terminal domain of PolI) similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 67.0
  • Bit_score: 132
  • Evalue 5.40e-29

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 240
ATGACCAGCTCGCCAGACGGACGTCCGGACGTCCATCTTCCCACTGCCCATCTCGTCGACGGCAGCCTGTACGTGTTCCGCGCCTGGCACTCGATGCCGGACGAGTTCCACGACGTCGACGGTCATCCGGTAAACGCCGTGCACGGCTATGCGCGCTTCCTGTGCGAGCTGCTGGAGCGGGCGCGACCGGAGCATGTCGCGGTGGCGTTCGACGCCTCGCTGACCAGCTCGTTCCGCAAC
PROTEIN sequence
Length: 80
MTSSPDGRPDVHLPTAHLVDGSLYVFRAWHSMPDEFHDVDGHPVNAVHGYARFLCELLERARPEHVAVAFDASLTSSFRN