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SCNpilot_expt_500_bf_scaffold_13831_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 3..851

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase family protein (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 70.5
  • Coverage: 322.0
  • Bit_score: 425
  • Evalue 1.40e-116
Pseudouridine synthase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VW74_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 329.0
  • Bit_score: 426
  • Evalue 2.00e-116
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 327.0
  • Bit_score: 425
  • Evalue 4.90e-116

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 849
GACGGCCCGGCCCGCTTCGACGAGATCGCCGTGATCAGCCGCGGCGGCAGCCACAGCTGGTTCCGCGTGGTGATCCGGGAAGGCCGCAACCGCGAAGTGCGCCGCTTGTGGGATTCACAGGGCTTCCTGGTCAGCCGGCTCAAGCGCATCCGCTACGGCCGGATCGAGCTGCCGCGCAACCTGCGTCGCGGCGAATGCGAGGCGCTCGATGCCGACAGCGTCAAGCAGTTGCGCCAGACCAGCGGGCTCGGACTCCCCCAGCCGGTGCTGACGCTGAGCCCGATCCTGCACCAGCGCCGTGCCACCCGCGGCGTCACCGAATATCGCCCGGAGCACGGCACCGGCAGCGCCTGGACCAGCGGCCAGGACGAGGCGCGCGAGCTGCGTGCCTACGACCGCATTCGCGAAGAACCCGCACGCGGACGCAAATCCGCGCCGCGCAACGGCCGCGAGGTCAACGGCAACGTGGCGGCACCTGAGCGGGCGCCGGGGAATGCGAAGCGGCACGGCAAGGGCCGTCGTGTGGCACCGGGCCAGGAGCTGCCTTCGGTGCGCACCTGGTTTGCCGGCGAGTCTCGCGATGGCAGCCCCCGTCCCGGCGGTCGGCGCGGCTTGGCCGGCGCCACCACCGGCAACCGTGGCGCGGCGGGTGGCCGCTCACGCGGCGCCCCCGCTGCCGGCAGCCCCTACGCCGGCACGGGCGGCAGCGGCAACCGCGCGCCTGCCAACCGACCCGGCCACGCCGGTCGTGGCCAGGGCGGCAACCGCGCCCCGGGCAGCCCGCGGCCCAAGGGCCATGGCGGCGGACGCCCGCCGGGTCGCGGCGGCAACCGCTCCGGCAACCGTTGA
PROTEIN sequence
Length: 283
DGPARFDEIAVISRGGSHSWFRVVIREGRNREVRRLWDSQGFLVSRLKRIRYGRIELPRNLRRGECEALDADSVKQLRQTSGLGLPQPVLTLSPILHQRRATRGVTEYRPEHGTGSAWTSGQDEARELRAYDRIREEPARGRKSAPRNGREVNGNVAAPERAPGNAKRHGKGRRVAPGQELPSVRTWFAGESRDGSPRPGGRRGLAGATTGNRGAAGGRSRGAPAAGSPYAGTGGSGNRAPANRPGHAGRGQGGNRAPGSPRPKGHGGGRPPGRGGNRSGNR*