ggKbase home page

SCNpilot_expt_500_bf_scaffold_14696_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(1273..2373)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 366.0
  • Bit_score: 670
  • Evalue 1.10e-189
DNA polymerase III, beta subunit (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 92.6
  • Coverage: 366.0
  • Bit_score: 663
  • Evalue 3.10e-188
  • rbh
DNA polymerase III subunit beta n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUB3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.3
  • Coverage: 366.0
  • Bit_score: 670
  • Evalue 8.00e-190
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1101
ATGCAATTCAGCATCCAACGTGAAGCTCTGCTCAAGCCGCTGCAACAGGTAGTGGGTGTGGTCGAACGGCGCCAGACGCTGCCGGTACTGGCCAACTTGCTGTTCAAGGTGGCGGACGGTCAGGTCTCGCTTACCGGTACCGACCTGGAAGTCGAGATGATCGCGGTCACCGAGGCGGAGAAGCTCGCCGACGGCGAGATCACCATCCCGGCCCGAAAGCTGTTCGACATCGTGCGCGCATTGCCCGACGGCGCCCATATCGAGCTGAAGTTGAACGGTGACCGCGTGGCACTGCACGCCGGACGCAGCCGGTTCACCCTGACCACGCTGCCGGCCAGCGAATTTCCCACGGTGGATCAGATCGAGGTGGTCGAGAAGGTCAACCTGCCGGAGGAGGTGCTGCGCGACCTGATGGAGCGCACGGCGTTCGCCATGGCCAACCAGGACGTGCGCTACTACCTCAACGGCATGCTGCTGGACCTGCAGGAACACAGCCTGCGCTGCGTGGCCACCGACGGCCATCGCCTGGCGATGAAGCAGACCGAGCTGCAGAGCTCGGTGAGCACCCGCCGCCAGATCATCATCCCGCGCAAGGGCGTCAACGAGCTGATCGGCCTGCTGGAAGGCGGTGACGGCGAGGTGGAGCTGGAGTTCGGCCGCAACCATCTGCGCGTGCGCCGGGGCAATGTCACCTTCACGTCGAAGCTGATCGACGGTCGTTTCCCGGATTACGAGGCGGTGATTCCGCTGGGTGCGGACAAGACCGCCACGCTGGACCGCGAGGTACTCCGCGGGGCGCTGCAGCGCGCGGCGATCCTGTCGAACGAGAAGTATCGCGGCGTGCGGCTGGAGCTGTCGCCGGGCAAGCTGCGCATCGTGGCGCACAACCCGGAGCAGGAAGAAGCCGTGGAGGAGGTCGAGGCCGACACCCATGTCTCCGACCTGGCGGTGGGCTTCAACGTGGGTTACCTGCTCGATGCCCTCGCGGCCCTGCGCGGCGACAAGGCGCGCTTGAGCCTGCGCGATGCGCAGTCCAGTTGCCTGGTGCAGGAGCACGACAACGAGCAGGCGCGCCATGTGATCATGCCGCTGCGGCTCTGA
PROTEIN sequence
Length: 367
MQFSIQREALLKPLQQVVGVVERRQTLPVLANLLFKVADGQVSLTGTDLEVEMIAVTEAEKLADGEITIPARKLFDIVRALPDGAHIELKLNGDRVALHAGRSRFTLTTLPASEFPTVDQIEVVEKVNLPEEVLRDLMERTAFAMANQDVRYYLNGMLLDLQEHSLRCVATDGHRLAMKQTELQSSVSTRRQIIIPRKGVNELIGLLEGGDGEVELEFGRNHLRVRRGNVTFTSKLIDGRFPDYEAVIPLGADKTATLDREVLRGALQRAAILSNEKYRGVRLELSPGKLRIVAHNPEQEEAVEEVEADTHVSDLAVGFNVGYLLDALAALRGDKARLSLRDAQSSCLVQEHDNEQARHVIMPLRL*