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SCNpilot_expt_500_bf_scaffold_15558_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3..467)

Top 3 Functional Annotations

Value Algorithm Source
Membrane protease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WD80_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 90.3
  • Coverage: 155.0
  • Bit_score: 280
  • Evalue 1.30e-72
Membrane protease {ECO:0000313|EMBL:EIL97421.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.3
  • Coverage: 155.0
  • Bit_score: 280
  • Evalue 1.80e-72
membrane protease subunit, stomatin/prohibitin similarity KEGG
DB: KEGG
  • Identity: 90.3
  • Coverage: 155.0
  • Bit_score: 278
  • Evalue 1.20e-72

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
ATGTTCGGATTCGTCGGTGTGTTGATCATCCTCGGCATCTTGCTGCTGTTCGCCGCGATCAAGATCCTGCCGGAGTACCAGCGCGGCGTGGTGCTGACCCTGGGCCGCTATACCGGCACCAAGGGCCCCGGCCTGGTGCTGCTGATCCCGGTGGTGCAGCAGATGATCCGGGTGGACCTGCGGGTCACCGTGCTGGATGTGCCGCCGCAGGACGTGATCTCGCGCGACAACGTCTCGGTGCGGGTCAATGCCGTGGTGTACTTCCGCGTGGTCGACTCGGACAAGTCGGTGCTGGAGGTGGAGAACTTCCTGCAGGCCACCAGCCAGCTGGCACAGACGCGGCTGCGCTCGGTGCTGGGCCAGCACGAGCTGGACGAGATCCTGTCCCAGCGCGAGTCGATCAACCACACCTTGCAGGTCACCCTGGACGAGGCCACCGACCCGTGGGGCATCAAGGTGATGAAC
PROTEIN sequence
Length: 155
MFGFVGVLIILGILLLFAAIKILPEYQRGVVLTLGRYTGTKGPGLVLLIPVVQQMIRVDLRVTVLDVPPQDVISRDNVSVRVNAVVYFRVVDSDKSVLEVENFLQATSQLAQTRLRSVLGQHELDEILSQRESINHTLQVTLDEATDPWGIKVMN