ggKbase home page

SCNpilot_expt_500_bf_scaffold_15727_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(705..2453)

Top 3 Functional Annotations

Value Algorithm Source
Cation/multidrug efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W2E7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 610.0
  • Bit_score: 843
  • Evalue 1.10e-241
Cation/multidrug efflux pump {ECO:0000313|EMBL:EIL93638.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 610.0
  • Bit_score: 843
  • Evalue 1.50e-241
cation/multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 69.8
  • Coverage: 610.0
  • Bit_score: 793
  • Evalue 5.30e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1749
ATGCTGATGCGCGAGTTCGCGGTGACCCTGGTCGCCACCATCGTGATCTCCGCGGTGGTCTCGCTCACCCTCACCCCGGCCCTGTGCGGGCGCAGCCTGGTGCACGAGCCGGAGGGCAGCCGCACGCCCGGGCGGCTGGAGCGGCTGGCCGAGCGCTTCGATGGCTGGCTGCTCGCGCAGTACCGGCGCGCGCTGGACTGGTCGATGCACCATCGCCGCCTGATGCGCTGGCAGCCCGCCGTGCTGCTCGTGCTCACCGGCGTGCTGGCGGTGCTGGTGGTGATGACCGCCGGCGGCGGCCTGATGCCGAAGGAGGACACCGGCCTGGTGCAGGTGCAGATCACTGCCGGCCCGAACATCTCGCCGACCCGGCTGACCACGCGCTCACGCGAGGTGGCCGCGGTGTTCCAGGCCGACCCGGCGGTGCTGGACGTATCCACCATCGTCAACGGCGGCAACGGCGCGCACCTGTTCGTCGACCTCAAGCCGCTGGGCGATCGGCCGGACGATCGCCACGTCACGGTGCAGCAGGTGGTCGACCGCCTCGCCGCCCACTTCAAGGGCGTCACCGACCTCGACGTGGCGGTGTCCGCGGTGCAGTTCTTCGGTGGTGGCGGTGGCGGCGGCCTGGGCGGCGGCAATGTCGGGCGCTACTCGTTCCAGCTCGACAGCCTGGACGGCACGCCGCTGCAGGAACCCACCCTGCATCTCGAACACGTCATGCGCGGCATGAAGCAGTTCAAGGATGTCACCAGCAGCTTCGACGGCATCGGCACCCAGCAGGTGGTGCAGGTCGACCGCGCCGCCGCCGCGCGGCTGCAGGTGAGCATGGGCCAGATCGACTCGGCGCTGTACAACGCGTTCGGGCAGAACCAGATCTCCACCATCTATTCGGACATCAACCAGTACCGCGTGGTGCTGACCGCCGACCGCGGCGACGAGCTGAGCCCGCAGGGATTGCTCGGCACCTATGTGCGCAGCAGCCGCGGCGAGATGATCCCGCTCTCCGCGCTGGCCACGATCCAGCCGCACCTGGCACCGGCCACGGTCAGCCACTTCAACCAGCTCGAATCGGCCTCGATCAACTACAACCTGGCCGAGGGCATCACCCCGGCGGAAGGCCTGAAGCTGGTCGACCAGGCGATCTTCGCCGCCGCGCTGCCGAACGGCATCCAGCGCAAGTACACCGGCGAGAACCAGAACCTGGTCGACGCGCTGAGCGACGTGCTGTTGCTGCTGCTGGCGGTGATCCTGGTGATGTACGTGGTGCTGGGCGTGCTGTACGAGAGCCTGATCCACCCGCTGACCCAGCTGACCCTGATGTCGGTGATCGCGGTGCTGATGCTGATCGGCATCGTCAAGAAGAACGCGATCCTGATGGTCGATTTCGCCCTGGTCGCCGAACGCGAGCGCGGCCTGTCGCCGCCCGAGGCCATCCGCGAGGCCGCGCTGGTGCGCTTCCGCCCGATCACCATGACCACCCTGGTGGCGATGGGCGCGGCGCTGCCGCTGGCGGTGGGCTTCGGCTACGGCTCGGAGCTGCGCCAGCCGCTGGGCATCGCGATCCTCGGCGGCCTGCTGGTGTCGCAGCTGCTGACCCTGTTGAGCACGCCGGCGATCTACCTGTGGCAGCACGACCACCGCGAGCGCAAGGCGGTGCAGAAGCGCATCCGCGAGGAATTCCGCCGTGGCCGCCAGCCGCCACCGATGCCCGCCGTGCCCAAGGGCATGCCGGCGCTGCCCAAGTAG
PROTEIN sequence
Length: 583
MLMREFAVTLVATIVISAVVSLTLTPALCGRSLVHEPEGSRTPGRLERLAERFDGWLLAQYRRALDWSMHHRRLMRWQPAVLLVLTGVLAVLVVMTAGGGLMPKEDTGLVQVQITAGPNISPTRLTTRSREVAAVFQADPAVLDVSTIVNGGNGAHLFVDLKPLGDRPDDRHVTVQQVVDRLAAHFKGVTDLDVAVSAVQFFGGGGGGGLGGGNVGRYSFQLDSLDGTPLQEPTLHLEHVMRGMKQFKDVTSSFDGIGTQQVVQVDRAAAARLQVSMGQIDSALYNAFGQNQISTIYSDINQYRVVLTADRGDELSPQGLLGTYVRSSRGEMIPLSALATIQPHLAPATVSHFNQLESASINYNLAEGITPAEGLKLVDQAIFAAALPNGIQRKYTGENQNLVDALSDVLLLLLAVILVMYVVLGVLYESLIHPLTQLTLMSVIAVLMLIGIVKKNAILMVDFALVAERERGLSPPEAIREAALVRFRPITMTTLVAMGAALPLAVGFGYGSELRQPLGIAILGGLLVSQLLTLLSTPAIYLWQHDHRERKAVQKRIREEFRRGRQPPPMPAVPKGMPALPK*