ggKbase home page

SCNpilot_expt_500_bf_scaffold_18292_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(622..1149)

Top 3 Functional Annotations

Value Algorithm Source
Lipid A 3-O-deacylase (PagL) n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VUU5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 169.0
  • Bit_score: 188
  • Evalue 4.40e-45
Lipid A 3-O-deacylase (PagL) {ECO:0000313|EMBL:EIL90986.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.4
  • Coverage: 169.0
  • Bit_score: 188
  • Evalue 6.20e-45
Lipid A 3-O-deacylase (PagL) similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 179.0
  • Bit_score: 181
  • Evalue 1.70e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGCACGTCCCGTTTTCCGCCCGCCTGCTGCTGCTGGCGCTGGCGTCGTCTCCGCTGCCGCTGCTGGCGCAATCGGTCCATCTGCAGGTGCAGGGCGGGCGCAGCTACATGGATGGGCATGGCACTCCCGCGCTGTTCGTCGAAGCGGTGTTCGACGACCATGCGATCGGCGACAGCCGCTGGAGCCTGGCACCCGACGTCTCGCTGGGCTGGATCGATGGCCGCGACATCGCACGCTTTCGCGACAATCGCTACCCCACCCGGGAGCAAGCCTGGCTACTGGCCGCCGGTGCGCGCCTGCAGTACCGCACGGCCGATGGTGCGCCGGGCCACTGGTTCGCCAGTTTCCAGCCGGCATTCAACACCGCACGCACGCAGGCGCTGAGCAGCCCGTACGAGTTCGTCACCACGCTCGGCTGGCAAGGGCACCGTTTCAGCTTCCAGATCCGGCACGTTTCCAACGCTCGCCTGCATCAGCCCAACCGCGGCGAAACCATGGCGCTGGTGGGCATCGGCTTCGATCTCTGA
PROTEIN sequence
Length: 176
MHVPFSARLLLLALASSPLPLLAQSVHLQVQGGRSYMDGHGTPALFVEAVFDDHAIGDSRWSLAPDVSLGWIDGRDIARFRDNRYPTREQAWLLAAGARLQYRTADGAPGHWFASFQPAFNTARTQALSSPYEFVTTLGWQGHRFSFQIRHVSNARLHQPNRGETMALVGIGFDL*