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SCNpilot_expt_500_bf_scaffold_16646_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(693..4436)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 999.99
  • Bit_score: 2336
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 999.99
  • Bit_score: 2314
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VS91_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 999.99
  • Bit_score: 2336
  • Evalue 0.0

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3744
ATGCTGGACATGACCCTGCGCGACATCGAGCGCATCCTGTACTTCGAAGCCTTCGTGGTGATCGACCCGGGCATGACCGCGCTGGAGCGCGGCCAGCTGCTCAGCGAGGACCAGTACCTGGAGGCGACCGAGGAACACGGCGACGAGTTCGACGCGCGGATGGGTGCCGAGGCGGTATTCCACCTGCTGAAGTCGCTCGACCTGCCGGGCGAAGTCATCCGCCTGAAGGAAGAGATCGCCTCCACCAATTCCGAGACCAAGCTGAAGCGGCTGACCAAGCGCGTCAAGCTGATCGAGGCGTTCCTGGAATCCGGCAACAAGCCGGAGTGGATGGTGCTGACCGTTCTTCCCGTGCTGCCGCCGGATCTGCGTCCGCTGGTGCCGCTGGATGGCGGCCGCTTCGCGACCTCCGACCTGAACGACCTGTACCGCCGCGTCATCAACCGCAACAACCGTCTGAAGCGGCTGCTCGAGCTCAATGCGCCGGACATCATCGTGCGCAACGAGAAGCGCATGCTGCAGGAATCGGTCGATGCGCTGCTCGACAAGCGCGCGCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGCAGGGCCGCTTCCGCCAGAACCTGCTGGGCAAGCGTGTTGACTACTCCGGTCGTTCGGTGATCGTGGTCGGTCCGACCCTGCGCCTGCACCAGTGCGGCCTGCCGAAGAAGATGGCGCTGGAGCTGTTCAAGCCCTTCATCTTCGCCAAGCTGCAGGCGCGTGGCGAAGCCACCACCATCAAGGCGGCGAAGAAGCTGGTCGAGCGCGAAGAGGCCCAGGTGTGGGACATCCTCGAAGAGGTGATCCGCGAACATCCGGTACTGCTGAACCGTGCGCCGACCCTGCATCGCCTCGGCATCCAGGCGTTCGAGCCGAAGCTGATCGAAGGCAAGGCGATCCAGCTGCATCCGCTGGTCTGCACCGCGTTCAACGCCGACTTCGACGGCGACCAGATGGCTGTCCACGTGCCGCTGTCGATCGAGGCGCAGCTGGAAGCGCGCACCTTGATGATGTCGACCAACAACATCCTGTCGCCGGCGAACGGCGAGCCGATCATCGTGCCGACCCAGGACGTCGTGCTGGGCCTGTATTACCTGACCCGTGAGCTGATCAACGCCAAGGGCACCGGCATGGTGTTCTCCGGCATTGGCGAGGCACGTCGCGCATACGACAACCGCGCAGTCGAGTTGCACGCCAAGGTCAAGGTGCGCATGAAGCTGGTGCACATCGCCGAAGACGGTACCCGCACGCAGCAGACCAGGATCGTCGATACGACGGTCGGTCGCGCCTTGCTGGCCGAGATCATGCCCGAGGGCCTCCCGTTCGAGCTGGCCAACACCGAGCTGACGAAGAAGAACATCTCGCGTCTGATCAACTCCAGCTACCGTCTGCTGGGCCTGAAGGACACGGTCGTGTTCGCCGATCAGCTGATGTATGCCGGCTATCGCTACGCGACTCGTTCGGGCATCTCGATCGGCATCGACGACATGCTGATTCCGGCCGAGAAAAAGCCGATCCTGGAAGAGGCCGAGAAGGAAGTCGTCGAGATCCAGCAGCAGTACCAGTCCGGTCTGGTCACCGCCGGCGAGCGCTACAACAAGGTGGTCGACATCTGGTCGCGCACCAGCGAGCTGGTGGCCAAGGCGATGATCGACGGCATCGGCACCGAGAAGGTGGTCGATGCCGACGGCAAGACGGTCAACCAGAAGTCGATGAACTCGCTGTACATCATGGCCGACTCCGGCGCGCGTGGCTCGGTGGCGCAGATTCGTCAGCTGGCCGGCATGCGCGGCCTGATGGCGCGCCCGGACGGCTCGATCATCGAGACCCCGATCAAGGCCAACTTCCGCGAAGGCCTGAACGTGCTGCAGTACTTCAACTCGACCCACGGCGCCCGCAAGGGCCTGGCCGATACCGCGCTGAAGACCGCCAACTCCGGTTACCTGACCCGTCGCCTGGTCGACGTGGCGCAGGACGTGGTCATCACCATGGACGACTGCGGCACCGAGGACGGCATCACCATGCAGCCGATCGTCGAAGGCGGCGACGTGGTCGAGCCGTTGCGCGACCGCGTGCTCGGCCGCGTGGTGGTCGAGGACGTCTACGCCCCGGGCGACGACGACCAGCCGATCGTCACCCGCGACACCCTGCTCAACGAGGCACTGGTCGAGAAGCTGGACAAGGCCGGCGTGCAGATCATCAAGGTGCGTTCGCCGATCACCTGCGAAGCCGAACATGGCGTGTGCAAGCTGTGCTACGGCCGCGATCTGGCCCGTGGCCATCTGGTCAACATGGGCGAGGCCGTGGGCGTGGTGGCCGCGCAGTCGATCGGCGAGCCCGGCACCCAGCTGACCATGCGCACCTTCCACATCGGCGGTGCGGCTTCGCGTGCGGCGGCGGTGGACAACGTGACGGTGAAAACCACCGGTTCGCTGAAGTACAACAACCTGAAGTCGGTGCAGCACAAGCAGGGCCATCTGGTGGCGGTGTCGCGTTCCGGCGACGGCGCCACCATCGCGGTCAAGGACGGTGCGGCGGTCAAGCCGGGCCAGACCGTGGCCAACTGGGACCCGCATACCCACCCGATCGTCACCGAGGTGGCCGGCGTGGTGCGCTTCATCGACTTCCTCGACGGCGTCACCGTGCAGAGCCAGACCGATGAACTTACCGGCCTGGAGTCGGCGGTGGTCACCGATCCGAAGCGCCGCGGCGCACAGGCGAAGGACCTGCGTCCGATCGTGCGCCTGGAAGACGCCAAGGGCCGCGAGCTGAAGCTGCCGGGCACCGACATCGCCGCGCAGTACTTCCTGCCGGCCGGTGCCATCGTGTCGATCCAGAACGGCGCCGAGGTGGGCGTGGGCGACGTGATCGCGCGCATTCCGCAGGAAAGCTCGAAGACCCGCGACATCACCGGCGGTCTGCCGCGCGTGGCCGACCTGTTCGAGGCGCGCAAGCCGAAGGAGCCGGCGATCCTGGCCGAGCGTTCGGGCATCGTCAGCTTCGGCAAGGACACCAAGGGCAAGCAGCGCCTGGTCATCAAGGACGTCGACGGCAACGAGCACGAGGAACTGATTCCGAAGTGGCGTCAGGTCATCGTGTTCGAGGGCGAGCATGTGGAGAAGGGCGAAACCGTCGTCGACGGCGAGCCGAGTCCGCATGACATCCTGCGCCTGCTGGGCGTGGAGCCGCTGGCCGGTTACCTGGTCAAGGAGATCCAGGACGTGTATCGCCTGCAGGGCGTGAAGATCAACGACAAGCACATCGAGGCGATCATTCGCCAGATGCTGCGCAAGATCGAGATCGTCGAGCCGGGCGACAGCCATTACCTGCGCGGAGAGCAGATCGAGCGCGTGCGGATCAACGCCGAGAACGAGCGGGCCGTGGCCAAGGGCGAGCGACCGGCCGAATACCAGTCGATCCTGCTTGGCATCACCAAGGCTTCGCTGGCGACCGAGTCGTTCATTTCGGCCGCCTCGTTCCAGGAAACCACCCGCGTGTTGACCGAAGCTGCGGTGCGCGGCACCCGTGATACCTTGCGGGGCCTGAAGGAAAATGTTATTGTCGGCCGTCTCATTCCGGCAGGCACGGGCTTGGCGTACCACGCATTGCGTCGTCGCCAGGGCGGTTTGACCGCCACGGAGCTCGAGACGCTTTCCGGAACCACGCCTGCGACCCCGGTCGCAGAGGTGACCGGTGCAGATGGTGGTGCCGAGTAA
PROTEIN sequence
Length: 1248
MLDMTLRDIERILYFEAFVVIDPGMTALERGQLLSEDQYLEATEEHGDEFDARMGAEAVFHLLKSLDLPGEVIRLKEEIASTNSETKLKRLTKRVKLIEAFLESGNKPEWMVLTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELNAPDIIVRNEKRMLQESVDALLDKRALKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLRLHQCGLPKKMALELFKPFIFAKLQARGEATTIKAAKKLVEREEAQVWDILEEVIREHPVLLNRAPTLHRLGIQAFEPKLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSIEAQLEARTLMMSTNNILSPANGEPIIVPTQDVVLGLYYLTRELINAKGTGMVFSGIGEARRAYDNRAVELHAKVKVRMKLVHIAEDGTRTQQTRIVDTTVGRALLAEIMPEGLPFELANTELTKKNISRLINSSYRLLGLKDTVVFADQLMYAGYRYATRSGISIGIDDMLIPAEKKPILEEAEKEVVEIQQQYQSGLVTAGERYNKVVDIWSRTSELVAKAMIDGIGTEKVVDADGKTVNQKSMNSLYIMADSGARGSVAQIRQLAGMRGLMARPDGSIIETPIKANFREGLNVLQYFNSTHGARKGLADTALKTANSGYLTRRLVDVAQDVVITMDDCGTEDGITMQPIVEGGDVVEPLRDRVLGRVVVEDVYAPGDDDQPIVTRDTLLNEALVEKLDKAGVQIIKVRSPITCEAEHGVCKLCYGRDLARGHLVNMGEAVGVVAAQSIGEPGTQLTMRTFHIGGAASRAAAVDNVTVKTTGSLKYNNLKSVQHKQGHLVAVSRSGDGATIAVKDGAAVKPGQTVANWDPHTHPIVTEVAGVVRFIDFLDGVTVQSQTDELTGLESAVVTDPKRRGAQAKDLRPIVRLEDAKGRELKLPGTDIAAQYFLPAGAIVSIQNGAEVGVGDVIARIPQESSKTRDITGGLPRVADLFEARKPKEPAILAERSGIVSFGKDTKGKQRLVIKDVDGNEHEELIPKWRQVIVFEGEHVEKGETVVDGEPSPHDILRLLGVEPLAGYLVKEIQDVYRLQGVKINDKHIEAIIRQMLRKIEIVEPGDSHYLRGEQIERVRINAENERAVAKGERPAEYQSILLGITKASLATESFISAASFQETTRVLTEAAVRGTRDTLRGLKENVIVGRLIPAGTGLAYHALRRRQGGLTATELETLSGTTPATPVAEVTGADGGAE*