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SCNpilot_expt_500_bf_scaffold_17018_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(260..700)

Top 3 Functional Annotations

Value Algorithm Source
TonB family protein n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1D6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 146.0
  • Bit_score: 228
  • Evalue 3.20e-57
TonB family protein {ECO:0000313|EMBL:EIL93277.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 146.0
  • Bit_score: 228
  • Evalue 4.50e-57
Gram-negative bacterial tonB protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 135.0
  • Bit_score: 218
  • Evalue 1.00e-54

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 441
ATGAACACCCCGTTTTCCTCCGTGTGCCGCGGCGTGCTGTTCGCGCTCGCCCTGGGCGTCGCAGCGCCGGTGCTGGCGCAGACGGTCAAGATTGACCAGCAGGACTTGTACCGCTACTGGATCCTGCTCAACACCCAGGTGCAGATGGATGCGCCCAACAGCGGCCTCAACCTGGACAAGCCCGGTTGCGTGGCGGTGACCTACACCATCGGTTCCGATGGCGTGCCGATGGACGTGCAGGTGGCCAAGGTGGAGCCGAAGAGCGACCTCGGCCCGATGGCGCGCAGCGCAGTGGCCAATTTCCGCTACGGCCCGTCGCTGAACAACAACATCCACCAGCCGGTGGCCACGTATTACATCGTGGTGTTCAACGGTCCCAAGGACCCGGCCGCGCGCGCCCAGCTGATGGCCCCGTGCAAGCTGCCCGGCTACCCGGCCTGA
PROTEIN sequence
Length: 147
MNTPFSSVCRGVLFALALGVAAPVLAQTVKIDQQDLYRYWILLNTQVQMDAPNSGLNLDKPGCVAVTYTIGSDGVPMDVQVAKVEPKSDLGPMARSAVANFRYGPSLNNNIHQPVATYYIVVFNGPKDPAARAQLMAPCKLPGYPA*