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SCNpilot_expt_500_bf_scaffold_21755_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 2..1630

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4W1F0_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 96.9
  • Coverage: 543.0
  • Bit_score: 1113
  • Evalue 0.0
TonB-dependent receptor {ECO:0000313|EMBL:EIL93291.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.9
  • Coverage: 543.0
  • Bit_score: 1113
  • Evalue 0.0
outer membrane receptor protein similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 545.0
  • Bit_score: 841
  • Evalue 1.20e-241

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
CTCGACGACAACTGGTCGATCACGCCGATGCTGATGGGGCAGCAGACCATCTCGCACGGCAACTTCGCCAGCGACCCGGCGGTGGGCGACCTGGCGGTCACGCACTTCTACCCCGAGCGCGTCAACGACCGCTGGTGGCAGGGTGCGCTGACCGTGCAGGGCAAGATCGGCAACTTCGACCTGACCTATGCCTACGCGCACCTCAAGCGCAACCAGGAGGAACAGACCGACTACAGCGACTACGGCTTCTGGTACGACGCGCTGTACGGCTCCGGCGCGTCCTTCTATGACAACAACGGCGCGCTGGTCAATCCTTCGCAGCACATCAGCGACCGCGACGGCTACACCAACAGCAGCCACGAGCTGCGCTTGGTCTCGCCGGCGGACGATCGCCTGCGCCTGGTCGCCGGCGCCTTCTGGCAGAAGCAGAAGCACGACATCCTGCAGAACTACCAGGTCGACGGCCTGGCCGACGCGATCTCCGTCACCGGCTGGAACGACACCATCTGGCTGACCCGGCAGATGCGTTACGACCGCGACGAGGCGCTGTTCGGCGAACTGTCGTGGGATTTCATCCCCGACGTGCTCACCGGCACCGTCGGCGAACGCTACTACCGCACCAGCAACCAGCTGTACGGCTACTTCGGCTACGGCGCGGGCTTCTCCTCCAGCCAGGGCGAGGCCGCCTGCGTGTCGCCCGAGCCGTTCATGGGCGCGCCGTGCCTGGACTTCGACAAGCGGGTGAAGGAGAGCGGCAACCTCACCAAGTTCAACCTGACCTGGAACATCAGCGACACCAAGATGATCTACGCCACCCGCTCGGAAGGCTTCCGCCCCGGCGGCGTCAACCGGCGCGGCACCCTGCTGCCGTACCACGCCGACTTCCTGATCAACCAGGAGCTGGGCTGGAAGACCTCGTGGCTGGACAACCGGGTGTCCTTCAACGGTGCGGTGTTCCGCGAAACCTGGAACGATTTCCAGTTCCCGATCCTGGGCGCGAACGGCCTCACCGAAATCAAGAACGCCAACTCCGCCCGCATCGACGGCCTCGAGTCGCAACTGAACTGGCAGGCCACCTACAACCTGCAGCTGACCGCCGGCTGGGCGCTGTACCGCGCGCGGCTCACCGCCAACTATTGCGGCTTCACCGACGCCAGCGGACGCCCGATCACCGACTGCCCGCCCGGCTCGCTCAATCCGCAGGACGGCAGCGTGGTGTCCGGGCCACTGGCGCCCAAGGGCACCCAGCTGCCGATCACGCCGAAGTTCAAGGGCAACCTGATCGCGCACTACAGCTTCACCCTCGGTGACAGCGATGCGTTCGTGCAGGCGGCGCTGGTCCACGTCGGCAAGCGCACGACCGACCTTCGCCTGAGCGAGCGCGCGCTGCTCGGCGACTTGCCCGCGTACAACACGCTGGACCTGTCCGCCGGCGTGCAGAAAGGCAGCTGGTCGGCCGACGTCTACATCAACAACGCCTTCGACAAGCGCGCCGCGCAATACAAGTACACCGAGTGCGGCGTCGACGTCTGCGGCGCGCACGGCGTGGTGGCGCAGTACCCGAACGGTCAGGTCTACACCGGCTACAGCCTGCCGCGCACCATCGGCATCCGCTTCAAGCAGGACTTC
PROTEIN sequence
Length: 543
LDDNWSITPMLMGQQTISHGNFASDPAVGDLAVTHFYPERVNDRWWQGALTVQGKIGNFDLTYAYAHLKRNQEEQTDYSDYGFWYDALYGSGASFYDNNGALVNPSQHISDRDGYTNSSHELRLVSPADDRLRLVAGAFWQKQKHDILQNYQVDGLADAISVTGWNDTIWLTRQMRYDRDEALFGELSWDFIPDVLTGTVGERYYRTSNQLYGYFGYGAGFSSSQGEAACVSPEPFMGAPCLDFDKRVKESGNLTKFNLTWNISDTKMIYATRSEGFRPGGVNRRGTLLPYHADFLINQELGWKTSWLDNRVSFNGAVFRETWNDFQFPILGANGLTEIKNANSARIDGLESQLNWQATYNLQLTAGWALYRARLTANYCGFTDASGRPITDCPPGSLNPQDGSVVSGPLAPKGTQLPITPKFKGNLIAHYSFTLGDSDAFVQAALVHVGKRTTDLRLSERALLGDLPAYNTLDLSAGVQKGSWSADVYINNAFDKRAAQYKYTECGVDVCGAHGVVAQYPNGQVYTGYSLPRTIGIRFKQDF