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SCNpilot_expt_500_bf_scaffold_2304_1

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: comp(3..893)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 297.0
  • Bit_score: 516
  • Evalue 6.40e-144
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034) similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 297.0
  • Bit_score: 516
  • Evalue 2.90e-143
DNA-directed RNA polymerase subunit beta n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUG6_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 297.0
  • Bit_score: 516
  • Evalue 2.00e-143

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 891
ATGGCGCGTACCATCCGTGAGCGTATGAATGTACGTGACAACGAGGTATTCACCCCGATTGACCTGATCAATGCAAGAACTTTATCTTCCGTGATCAATTCATTCTTCGGTACTTCCCAGTTGTCTCAATTCTTAGACCAAACCAATCCGTTGTCTGAAATTACGCACAAACGTCGTATTTCCGCGCTCGGACCAGGCGGTCTTTCCCGTGAAAGAGCAGGCTTCGAGGTACGTGACGTTCACTACTCTCACTATGGCCGTCTGTGTACCATTGAAACACCAGAGGGACCAAACATCGGTCTGATCTCCACTTTGTGTGTACACGCTAAGATCAACGATATGGGCTTCATCGAAACGCCTTATCGTAAAGTAAACAATGGTAAAGTTGATCTGAAAGATGAAATTTACCTGTCTGCTGAAGAAGAAGATGATAAACGTATCGCCCAGGCGAATGCGATCATTGATGAAAAAGGAAATTTCTTAGAAGATAAGATCAAATCCCGTGAAACCGGTGACTTCCCGATCCTCGAAAGAGAAGAAGTGGAATTCATGGACGTAGCACCGAACCAGATCGTAGGTTTGTCTGCATCTTTGATTCCGTTCCTGGAGAATGATGATGCCAACCGTGCCTTGATGGGCTCGAACATGCAACGTCAGGCTGTCCCTTTGATCCGTCCGCAGGCACCTATCGTAGGTACCGGACTGGAAGCTAAAGCTGCCCGTGATGCCCGTACCCAGATTCATGCTGAAGGTACCGGTGTGGTAGAATATGTAGATGCTAATGAAATTCACGTTCGCTACGACAGAACCGACAAACAACGTCTGGTTTCTTTCGAAGATGATCTGAAAGTATATAAATTAATCAAGCACCGCAAAACGAACCAAAGTACC
PROTEIN sequence
Length: 297
MARTIRERMNVRDNEVFTPIDLINARTLSSVINSFFGTSQLSQFLDQTNPLSEITHKRRISALGPGGLSRERAGFEVRDVHYSHYGRLCTIETPEGPNIGLISTLCVHAKINDMGFIETPYRKVNNGKVDLKDEIYLSAEEEDDKRIAQANAIIDEKGNFLEDKIKSRETGDFPILEREEVEFMDVAPNQIVGLSASLIPFLENDDANRALMGSNMQRQAVPLIRPQAPIVGTGLEAKAARDARTQIHAEGTGVVEYVDANEIHVRYDRTDKQRLVSFEDDLKVYKLIKHRKTNQST