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SCNpilot_expt_500_bf_scaffold_5014_6

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: comp(3283..3618)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L24 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PU82_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 73.0
  • Coverage: 111.0
  • Bit_score: 170
  • Evalue 7.90e-40
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 111.0
  • Bit_score: 170
  • Evalue 2.50e-40
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 111.0
  • Bit_score: 170
  • Evalue 1.10e-39

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Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 336
ATGAAAACTAGATTCAAACCAAAATTCAATATCAAAAAAGGCGACCAAGTAGCAGTAATCGCAGGCGATGATAAAAGCCGCACTACTCCTCGTCAGGTATTGGCAGTATATCCGCTTAAAGGGCGTGTATTGGTAGAGGGTGTTAACATCGTTACTAAACACGTTAAACCAAGCGCTAAAAATCCGCAGGGTGGCATCGTAAAACAAGAAGCGCCGATTGCAATCTCTAACATCATGTTGTGGGATGCTAAAGCAGGTGCTCCTGTACGTGTGAACCGTGAGCAAAAAGATGGTAAAGCGGTTCGTATTTCTAAAAAAACTAGTCAAGCAATTTAA
PROTEIN sequence
Length: 112
MKTRFKPKFNIKKGDQVAVIAGDDKSRTTPRQVLAVYPLKGRVLVEGVNIVTKHVKPSAKNPQGGIVKQEAPIAISNIMLWDAKAGAPVRVNREQKDGKAVRISKKTSQAI*