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SCNpilot_expt_500_bf_scaffold_537_62

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: comp(63952..64905)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Afipia birgiae RepID=UPI0002E19370 similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 314.0
  • Bit_score: 509
  • Evalue 2.70e-141
  • rbh
xerD; tyrosine recombinase XerD; K04763 integrase/recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 83.0
  • Coverage: 317.0
  • Bit_score: 502
  • Evalue 1.00e-139
  • rbh
Tyrosine recombinase XerD {ECO:0000313|EMBL:AEI05156.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 317.0
  • Bit_score: 502
  • Evalue 4.60e-139

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Taxonomy

Oligotropha carboxidovorans → Oligotropha → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
ATGGCGGCATCCTCCGACGCGCAGCTCATCCATCTGTTCCTCGACATGCTGGCCGCCGAACAGGGCGCCGGTATCAACACGCTGGCGGCCTATCGCGGCGATCTCGAAGATCTGTCGGACTTCATCGCCCATCAGGGCAAGAGCTTCGTCAGCGCCGACACGCAAAGCCTGCGCGATTATCTCGCCGATCTGGACACCCGCGGCTTCAAGTCATCGAGCGTGGCGCGGCGGCTGTCGTCGATGCGGCATCTGTTTCGCTTCCTGCTCAACGAGCGGCGGCGCGAGGACGATCCGGCGGCGATCCTGTCGGGGCCGAAACGCGCGCGGACCTTGCCCAAGGTGCTGTCGATCGCCGATGTCGATCGCCTGCTGGAGAAGGCGCGGCAGCTGGCCGAAACGCCGGAGCAGTCGCCGCTGCAGACGTTCCGCGCCCTGCGGCTGTGCTGCCTGCTCGAAGTGCTCTACGCCACGGGCTTGCGCGTCTCCGAACTGGTGGCGCTGCCGCTGTCGGCGGCGCGGCGCGACGCGCGCATGATCGTGGTGCGCGGCAAGGGCAACAAGGAACGTCTGGTGCCGCTCAACCAGTCGTCACGGCAGGCGATGGCGGACTATCTTGCCGCCATGGAAGCCGCGCACGGCGGCAAGACATCCGCGCTCGCGCGCGGCAAATGGCTGTTTCCCTCATCCGGCGACAGCGGGCACCTGACGCGGCAGCATTTCGCGCGCGACCTCAAGGAGCTTGCCGCCGCCGCCGGCCTGCCGCCGCGCATCGTCAGCCCGCATGTGCTGCGCCATGCCTTCGCCAGCCATCTGCTGCACAATGGCGCGGATCTGCGCATCGTGCAGACCCTGCTCGGCCATACCGACATTTCCACCACGCAAATCTACACCCACGTCGTCGAAGAGAGGCTGAAGAGCCTGGTGCGGGACCTGCATCCGCTTGCGGAAAAATAA
PROTEIN sequence
Length: 318
MAASSDAQLIHLFLDMLAAEQGAGINTLAAYRGDLEDLSDFIAHQGKSFVSADTQSLRDYLADLDTRGFKSSSVARRLSSMRHLFRFLLNERRREDDPAAILSGPKRARTLPKVLSIADVDRLLEKARQLAETPEQSPLQTFRALRLCCLLEVLYATGLRVSELVALPLSAARRDARMIVVRGKGNKERLVPLNQSSRQAMADYLAAMEAAHGGKTSALARGKWLFPSSGDSGHLTRQHFARDLKELAAAAGLPPRIVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVVEERLKSLVRDLHPLAEK*