ggKbase home page

SCNpilot_expt_500_bf_scaffold_5412_5

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: comp(3595..5376)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P458_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 83.5
  • Coverage: 577.0
  • Bit_score: 946
  • Evalue 9.40e-273
  • rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKS37332.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.5
  • Coverage: 577.0
  • Bit_score: 946
  • Evalue 1.30e-272
diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 566.0
  • Bit_score: 802
  • Evalue 6.90e-230

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1782
TTGACATTCACGCGCCTCCATACCCCGCCGCAACCGGGGCTCGCGCCGGGCCCCGCAGACACTGCGCCGGTTAACCGGAGTGCGCCGGTCACGGATCGCGATCTTCTGGCGATGCTCGGTCAAGTCAGCTTCATCTGGGACATCGCAAGCGATGTTCTGCACTGGAGCGACAATGTCGGTGCGGTGCTGCGCGACATTCCCCCGGATGCGCTCTCAAACGCCAGCGACTATGCCAAGCTGATCGAGCCCACGGTGGCCATCCGTAACAATGCCGTGCTCAATTCCGCCGCGGTCGATATCGGCGAAGGCGTCCCTTATCAGATCGAATACGGTCTGCGCGCCAGCGTGGCGGCCCCGGTGCTTTGGGTCGACGAATGCGGCCACTGGTTTGCCGGGCCGGACGGCAAGCCGTCGCACGTCCATGGCATCATCCGTATCAACAACGAGCGGCATGCGCGCGACGAGCAGCTTCTGAAGCTGTCGCAGGACGATTCCCTGACCGGCGAGTTCAACCGCACGCGCCTGACCGCCGCGCTGGCCGAGGCCATCGAGGAGGCCGTCCGCTTCCGCTCCTCCTTTGCGTTCATGCTGGTTGGCATCGATCATCTGGCGCAGATCAACGACGCTTTCGGTCATGAGGTCGCGGATGAAGTGATCTGCGAAGTCGCCGGCCGCATTCGCGCGCGGCTGCGCGGCGGGGATGTTCTGGGCCGCTTTTCCGGCAACATATTCGGGCTGAGCCTCAAGAACTGTTCCGTGGACGACATGCATGTCGCCGCCGAGCGCTTTCTGTCCGGCGTGCGCGATGATGTCGTGCCAACCCGGTCCGGCCCGGTGGCCGTGACGGTTTCGATCGGCGCCGTCAACGCACTCCGCCATGCGCGGACCGTTGAAGAAGCGATGAGTCGCACGCAGGAGGCGCTTGATTTTGCCAAGATGCGCCGGCGCGGGTCGCTGATGGTCTGGCAGCCGAACGTCGAGCGCGATGCTCAGCGCCGCGTCAACATCCGTGTGACCGACGAGATCGTCACCGCCCTGAACGAGCGCCGCATCGTGATGGCGTTCGAGCCGGTGGTCACCACGGATACGCGGCAGGTGGCGTTTCACGAATGTCTGGTGCGGACGCGTCAGGAGGACGGCGGATACTCGCTGTCTCCCGACATCGTGCCTGTCGCCGAAAAGCTGGGCCTGATCCGCCTGGTCGACCACCGGGTGCTCGAACTGGTGGTCAGCGAACTTGCGATGGCTCCGCAGGCGCATCTCAGTCTCAACATCTCGCCGCGCACCACGATGGACCCCGACTGGTGGGCCAGCATCGAGACCTTGATGCAAACCCATCCCGGTGTCGCCGAACGGCTGATCGTGGAAATCACCGAAACCGTGGCGATCCAGAATCTGGACGATGTGCGCGGTTTCGTCGCGCGATTGAAGAAACTCGGCAGCCAGATTGCGATCGACGATTTCGGCGCGGGCTACACGTCATTCCGCAATCTGCGAAAGCTCGGCGTGGATATCGTGAAGATCGACGGCGCATTCGTGCAGAATATCGCGCGCTCGTCGGATGACCGTGCCTTCGTGCAGACGCTGATCGATCTGGCGCATCGTCTGGGCATCAAGACTGTCGCCGAATGGGTTCAAGACGAAGAGTCGGCCGCGCTGCTGCAGGGGTGGGGCTGCGACTATATTCAGGGGCGTCTGATCGGTCTGGCATCGCTGTCGAAGCCATGGGCCGCCCTGGATGCCGCCGTGCAGGAGCCTCGTCTGAGGCGCGCCACGAACTGA
PROTEIN sequence
Length: 594
LTFTRLHTPPQPGLAPGPADTAPVNRSAPVTDRDLLAMLGQVSFIWDIASDVLHWSDNVGAVLRDIPPDALSNASDYAKLIEPTVAIRNNAVLNSAAVDIGEGVPYQIEYGLRASVAAPVLWVDECGHWFAGPDGKPSHVHGIIRINNERHARDEQLLKLSQDDSLTGEFNRTRLTAALAEAIEEAVRFRSSFAFMLVGIDHLAQINDAFGHEVADEVICEVAGRIRARLRGGDVLGRFSGNIFGLSLKNCSVDDMHVAAERFLSGVRDDVVPTRSGPVAVTVSIGAVNALRHARTVEEAMSRTQEALDFAKMRRRGSLMVWQPNVERDAQRRVNIRVTDEIVTALNERRIVMAFEPVVTTDTRQVAFHECLVRTRQEDGGYSLSPDIVPVAEKLGLIRLVDHRVLELVVSELAMAPQAHLSLNISPRTTMDPDWWASIETLMQTHPGVAERLIVEITETVAIQNLDDVRGFVARLKKLGSQIAIDDFGAGYTSFRNLRKLGVDIVKIDGAFVQNIARSSDDRAFVQTLIDLAHRLGIKTVAEWVQDEESAALLQGWGCDYIQGRLIGLASLSKPWAALDAAVQEPRLRRATN*